Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_025115.1 Length=40002 Score E Sequences producing significant alignments: (Bits) Value seq5617 118 3e-22 seq3549 89.7 1e-13 >seq5617 Length=361 Score = 118 bits (130), Expect = 3e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 15335 TCATGGGATACCACTGGGAGCGGTTGGGGTATCCGAGCGTGCAGGCATTCGCGGACGCCA 15394 ||||||| | |||||| |||| |||| ||| | ||||||||| |||||| || | || Sbjct 254 TCATGGGGTTTCACTGGCAGCGCCTGGGCTATGCCAGCGTGCAGACATTCGTCGAGGACA 195 Query 15395 TGCAAAGC-GGCGAGGGAGCGCAGCTCGACGCCTTCGTGCGGTTCGTCACCAGTGACCCC 15453 || | || |||||| |||| ||| ||| |||||||| ||| || | ||||| Sbjct 194 TG-AGCGCTGGCGAGTCTCAGCAGTTCGCCGCGTTCGTGCGTTTCATCCAGACCGACCCG 136 Query 15454 GCCTTGCACAAGGCGCTCACGGGCGGGAAGTGGTCCGCCTTCGCCGCGCTCTACAACGGG 15513 | |||| |||||| | | || | | || ||||||| ||||| ||||||||||||| Sbjct 135 GTTCTGCATAAGGCGTTGAAGGCCCGCAAATGGTCCGAATTCGCGACGCTCTACAACGGC 76 Query 15514 CCAGCCTACAAGGACAACCTGTATGACGTGAAGCTGGCGCGCGCCTTCG 15562 || | |||| || ||||| || ||| | ||||| |||||||| || Sbjct 75 CCGGACTACCAGCGAAACCTATACGACATCAAGCTCCAGCGCGCCTACG 27 >seq3549 Length=386 Score = 89.7 bits (98), Expect = 1e-13 Identities = 100/134 (75%), Gaps = 6/134 (4%) Strand=Plus/Minus Query 13837 CGCACCACCGTGGAGCTGATCTGATGCGCGTG------CGGGCCATCCAGGGCGACACCA 13890 ||||||||||||||| |||| |||||| ||| || ||| ||||| ||||||| Sbjct 156 CGCACCACCGTGGAGTTGATTTGATGCCCGTCACCGTCCGCGCCTTCCAGAACGACACCG 97 Query 13891 TCGACGCCATCTGCCGGCGGGTGTACGGCCGCACGGCGAGCGTGACGGAAGCCGTGCTGG 13950 | |||||| | ||| |||| ||||||||| | || | ||||| || || || || | Sbjct 96 TTGACGCCCTGTGCTGGCGTCACTACGGCCGCCCCGCCGGTGTGACCGAGGCGGTACTCG 37 Query 13951 CCGCCAACCCCGGC 13964 ||||||||||||| Sbjct 36 ACGCCAACCCCGGC 23 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127875906891008