Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq3611 111 1e-19 >seq3611 Length=65567 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | |||||| || ||||| ||||| || || ||||| || ||| Sbjct 3055 CCACCACGAAGACGGAGCACCAAGTGGAGAGTACTCTCCTTCTGGATGTTATAGTCGCTC 3114 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || ||||| || || ||||| || |||| ||||| ||||| | || Sbjct 3115 AGAGTGCGACCATCCTCCAACTGCTTGCCGGCGAAGATCAGGCGCTGTTGATCCGGGGGA 3174 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||| || ||||| || || |||| ||| |||| ||||||||| || || || Sbjct 3175 ATACCCTCCTTGTCCTGGATCTTGCTCTTCA-CATTGTCAATGGTGTCGCTGGACTCGAC 3233 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || | ||| || |||||||||||||| Sbjct 3234 CTCCAGGGTGATGGTCTTGCCGGTGAGCGTCTTGACAAAGATCTGCAT 3281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328680540395520