Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq3611 100 7e-16 >seq3611 Length=65567 Score = 100 bits (110), Expect = 7e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || |||||| | || || || |||||||| |||| || ||| | Sbjct 3713 ACCGGCAAGACCATCACTCTTGAGGTTGAGTCGTCTGACACTATCGACAACGTCAAGTCA 3654 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 |||||||| || || || || ||| ||||| || | || |||||||| || ||| Sbjct 3653 AAGATTCAGGATAAGGAGGGCATTCCCCCGGATCAACAGCGCCTGATCTTCGCTGGTAAG 3594 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | || ||||| | ||| | |||| |||||| ||||||| ||||||||||||||| Sbjct 3593 CAGCTTGAGGATGGTCGCACTCTCTCCGACTACAACATCCAGAAGGAGTCTACTCTTCAC 3534 Query 206374 CTTGT 206378 || || Sbjct 3533 CTAGT 3529 Score = 86.0 bits (94), Expect = 1e-11 Identities = 142/203 (70%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTG-- 206230 ||||| ||| ||| |||||||| || || || ||||| |||| || || || | | Sbjct 3278 CAGATCTTTGTCAAGACGCTCACCGGCAAGACCATCACCCTGGAGGTCGA--GTCCAGCG 3221 Query 206231 ACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTC 206290 |||| | || || ||| ||||| || || || || || ||| ||||| | Sbjct 3220 ACACCATTGACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCGGATCAAC 3161 Query 206291 AAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 206350 | | || ||||||||||| ||||||||||| ||||| | ||| || ||| || ||| Sbjct 3160 AGCGCCTGATCTTCGCCGGCAAGCAGTTGGAGGATGGTCGCACTCTGAGCGACTATAACA 3101 Query 206351 TCCAGAAAGAGTCTACTCTTCAC 206373 ||||||| ||| |||||| ||| Sbjct 3100 TCCAGAAGGAGAGTACTCTCCAC 3078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181732127985376