Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_025430.1 Length=42351 Score E Sequences producing significant alignments: (Bits) Value seq2362 82.4 2e-11 >seq2362 Length=394 Score = 82.4 bits (90), Expect = 2e-11 Identities = 152/223 (68%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 317 CCTTTGCGCAGGTACTGGCTGGCGATTTCTGCCAGCTTTCCGAAGATGACCACGCGGTGC 376 || ||||||||||| | || |||||| || |||| || ||||| || |||||||||| Sbjct 392 CCCTTGCGCAGGTATTCGCCGGCGATCTCCGCCACTTTGCCGAACATCGACACGCGGTGC 333 Query 377 CATTCCGTTTTTTCTTTCTTCTCCCCTGTCTGCTTATCCTTCCAGGTTTCAGACGTGGCA 436 ||||| || || || ||||| || |||||||| || |||| |||| || || Sbjct 332 CATTCGGTCTTCTCGACCTTCTGGCCGGTCTGCTTGTCGGTCCACTGTTCACTGGTCGCC 273 Query 437 ATTGATAACTGCGCCACGCCGTTGCCGTTCGGCAGCGTGCGGAATTCTGGATCGTTGCCT 496 | | | | |||| |||||||||| ||||| ||| | || ||||| | ||| Sbjct 272 AGACTCAGGTTGGTCACGGCGTTGCCGTTAGGCAGGTAGCGAACCTCGGGATCCTGGCCG 213 Query 497 AAGTTGCCAATGATTTCTACTTTGTTCAGTGAACCGGCCATAA 539 | |||| | | | |||||||| | || |||||||| Sbjct 212 CACGTGCCGACCAATATGACTTTGTTAACCCCACGGGCCATAA 170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135392184172736