Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq5020 86.0 2e-11 >seq5020 Length=23815 Score = 86.0 bits (94), Expect = 2e-11 Identities = 121/169 (72%), Gaps = 1/169 (1%) Strand=Plus/Plus Query 443699 CTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758 ||||| |||| || || || || |||| || || || | || || ||||| |||| Sbjct 18513 CTTCGGTCAGCGCCTCGTTGCCTTCGCTGCTGTTGAGGGTATTTTCTTCAGCGGT-GCTT 18571 Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818 | || |||||||||||| | || |||||||| || |||| ||||| || || |||| Sbjct 18572 TCGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTCACTTTCTCCAACG 18631 Query 443819 AACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867 | || ||| ||| || |||||| | || ||||| |||||||| || Sbjct 18632 AGCTTATCTCTCGTGATGAGGGTCTTCACACTGACTTTGCCTGTCTCCT 18680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588216827149920