Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq3618 147 3e-30 >seq3618 Length=19201 Score = 147 bits (162), Expect = 3e-30 Identities = 985/1568 (63%), Gaps = 27/1568 (2%) Strand=Plus/Plus Query 117998 GATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTG 118057 ||| ||||| |||||| |||| ||| ||| | ||| || ||||| | ||| || || Sbjct 922 GATCTCCCAAACAGTCTTGTACAGGGCCTTGACATCGTCAGGGATGTTGGGGATGTTCTG 981 Query 118058 GATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTT 118117 |||||| || | | | ||| | | |||||| | | |||||| ||||||| | Sbjct 982 GATGGAGCCGTTCTCGGCAATGATGCGGTTTTTCATAGCATCTGACCAAAGACCAAGTTC 1041 Query 118118 TTTGAGATCCTCCACGAG--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGT 118175 ||||||| || || ||| | ||||||| ||||| || || || || Sbjct 1042 AACAAGATCCTTCAGCAGCCATGGGT--TGACAACCTGGAACTCGCCAGCAAGCACACGG 1099 Query 118176 CTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCT 118235 | | | ||||| || | || || |||||||||||||| ||||| || | || || | | Sbjct 1100 CGCTGGTAGATGTTCGAAGTATAGGGCTCAAAGCACTCGTTGTTGCCAAGAATCTGTGAT 1159 Query 118236 GTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATG 118295 || ||| ||||||||||| || | || || ||||| || | || | ||| | || Sbjct 1160 GTACTGGCAGTGGGCATGGGGGCAAGCAGCAGACTGTTGCGAATGCCATGCTCCTTGATT 1219 Query 118296 CGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAAC 118355 | |||||||| ||||||||| | | | | || | | ||||||||| | Sbjct 1220 TGCTCCTTGAGGCTGTCCCAGTCCCACAGGTCGCTGGGCTTGACGTTCCACATATCGTAT 1279 Query 118356 TGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC 118415 || || ||||||| ||| || || || |||| || | | |||||||||||||||| Sbjct 1280 TGCAGAATACCTTCGGAGGCAGGGGAACCCTTGAACGACGAGTATGGGCCCTCAACCTTG 1339 Query 118416 GCCAATTC-GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATT 118474 || | || || | || | || ||||| || || || ||||| || | || Sbjct 1340 GCGATCTCAACAGAT-GCAGTTAAAGCAGCGTGGTAAATAGTCTCAAAGATCTGCTTGTT 1398 Query 118475 CATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACA-AAATAAATACATCCGCGA 118533 | | ||||| || || || | | || ||| | || || | || |||| Sbjct 1399 GAGCTCACGAGCCTCAGGCGACTCGAAAGGCAATC-GCAGAGCAAGGAAGGCGTCAGCGA 1457 Query 118534 GACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC-- 118591 | ||||| ||||||| || || || || || | ||| || || || || ||| Sbjct 1458 GGCCTTGAACACCGACACCGATGGGCCGGTGACGCATGTTGCTGTTACGTGC---CTCAG 1514 Query 118592 -CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGA 118650 || ||||| || |||||||| | | || ||||| ||||| | || | Sbjct 1515 GGACAGGATAGTGGTTTACATCGATAATCTTGTTGAGATTGCGAACCACAACTTGGGTAA 1574 Query 118651 TTTCATGAAGCTTTTCGTAATCAAAAC-TGCGAGTCTCTTCATTGACATACTTAGGAAGG 118709 ||| || ||||| | | | || || | ||| | || | |||| | | || || Sbjct 1575 CTTCGTGCAGCTTCTTGAAGTCGAAGCATGC-ATCATCGTAGTTGATAAAGGCAGACAGA 1633 Query 118710 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 118769 || | || || || || || |||| ||| || | ||| ||||| || || || Sbjct 1634 GCCAGAGAAGCAAGGTTGCAAACAGCAACCTCGTCAGGAGCAGAATACTCGATGATCTCA 1693 Query 118770 GTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 118829 ||||| | ||| || || || || || | |||||| || || ||| ||| || Sbjct 1694 GTGCAAAGGTTGGAGCTGCGGATTGTACCAAGGTTCTTCTGGTTGCTCTTACGGTTGCAA 1753 Query 118830 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 118889 || |||||||| |||||| |||| | || ||||| || || | || || || | | | Sbjct 1754 GCGTCCTTGTAGAGCATGAATGGATTACCAGTCTCAGTCTGTGCCTCAAGGATCGAGTAC 1813 Query 118890 CAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAG 118949 || | | ||| | ||| ||| | ||||| ||||||||| ||| Sbjct 1814 CAAAGCTTTTGAGCCTTGATGGTGCGCTTGCCCTTGCCCTCCCTCTCGTACTTCTCGTAC 1873 Query 118950 AGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAG 119009 | || ||||| || ||||| | || | || || || || || || || | | Sbjct 1874 AATGCCTCAAATTCCTCACCATAGCAGTCGGCAAGGCCAGGGCACTCATTAGGACACATG 1933 Query 119010 AGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCC 119069 || | ||| | ||| | ||| || |||||||||||||| || || ||||| || || Sbjct 1934 AGTGTCCACTCGCCATTTTTCTCGACACGCTTCATGAAGAGATCCGGAATCCAAAGAGCG 1993 Query 119070 GAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 119129 ||| ||||| || ||| | || || | || || || ||| | || | || Sbjct 1994 AGGAAAAGATCACGGGCACGAACCTCCTCTTTGCCATGGTTCTTACGGAGATCGAGGAAC 2053 Query 119130 TCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGA 119186 || | || || | |||||| ||||| ||||| | |||| | || ||| | Sbjct 2054 TCAAAGACGTCTGAGTGCCAGGGTTCAAGGTAAATGGCGAAGGCACCAGGACGCTTATTG 2113 Query 119187 CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCA 119246 ||| | |||| || || | |||||| ||| || || || ||||| || | | ||| Sbjct 2114 CCACCTTGGTCAACGTAGCGGGCAGTGTTGTTGAAGACCCGGAGCATAGGCACAAGGCCA 2173 Query 119247 TCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATC-GTGGATGTG 119305 | ||| ||| || || || ||| ||| | | || | || || ||| | | Sbjct 2174 TTGGAGGTGCCGTTGGTGCCGGCAATGTAAGAGCCAGTAGC-CCGAATTCGGTGAACATT 2232 Query 119306 CATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGAT 119365 | ||||| || || ||| || ||||| ||||| | |||| || | ||||| Sbjct 2233 GAGGCCAATGCCACCAGCCATTTTGGAGATCATAGCGCAAGTCTTGAGCGTGTCATAGAT 2292 Query 119366 CCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-G 119424 ||||| || |||| | || | ||| || ||||| ||| | ||| || || | Sbjct 2293 GCCATCAATGCTGTCATCTTTCATGTCGACAAGAAAGCAAGACGATAGCTGA-GCTTGAG 2351 Query 119425 GTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTT 119482 | |||||||| |||||||| || |||| ||||| ||| | | |||| ||||| Sbjct 2352 GGGTACCAGCATTGAAGAGCGTGGGTGAGGCGTGAGTGA--AAAACTTGCTCGACATGAG 2409 Query 119483 GTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCAT 119542 || ||||||||| | ||| ||| | || || || |||| | ||| ||||| Sbjct 2410 GTTGTAGGTCTCAATAACGCGCTCAATATTGTCACCCCAGATGCCGACAGCGACGCGCAT 2469 Query 119543 AAACATGT 119550 || ||||| Sbjct 2470 AATCATGT 2477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618389930543360