Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq3618 219 5e-52 seq5020 145 9e-30 seq4016 100 3e-16 >seq3618 Length=19201 Score = 219 bits (242), Expect = 5e-52 Identities = 905/1402 (65%), Gaps = 49/1402 (3%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| ||||| | |||||||| || |||| || || || | ||||| || Sbjct 2484 CCACAGCACATGATTATGCGCGTCGCTGTCGGCATCTGGGGTGACAATATTGAGCGCGTT 2425 Query 104282 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339 | ||||| ||| || ||||| |||| | | ||| |||||| |||| || |||| Sbjct 2424 ATTGAGACCTACAACCTCATGTCGAGCAAGTTTT--TCACTCACGCCTCACCCACGCTCT 2367 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 ||||||||||||| || | | || | || |||||| ||| ||| || || || | Sbjct 2366 TCAATGCTGGTACCCCTCAAGCTCAGCTATCGTCTTGCTTTCTTGTCGACATGAAAGATG 2307 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCAAAGTGGGC 104457 || || | || ||||||| || || | | | | ||||| | ||||| || ||| Sbjct 2306 ACAGCATTGATGGCATCTATGACACGCTCAAG-ACT-TGCGCTATGATCTCCAAAATGGC 2249 Query 104458 TGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGAC 104517 ||| || ||||| | | | || | | || | | ||| ||| || || Sbjct 2248 TGGTGGCATTGGCCTCAATGTTCACCGAATTCGGGCTACTGGCTCTTACATTGCCGGCAC 2189 Query 104518 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 104577 || || || |||| || | || ||||| || || || ||| ||| || ||||| Sbjct 2188 CAACGGCACCTCCAATGGCCTTGTGCCTATGCTCCGGGTCTTCAACAACACTGCCCGCTA 2129 Query 104578 TGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATG 104631 || | |||| ||| ||||| || | |||| | || ||||| || || Sbjct 2128 CGTTGACCAAGGTGGCAATAAGCGTCCT---GGTGCCTTCGCCATTTACCTTGAACCCTG 2072 Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCG 104691 |||| | || || | |||||||| || | ||| ||||| || | ||||||| || Sbjct 2071 GCACTCAGACGTCTTTGAGTTCCTCGATCTCCGTAAGAACCATGGCAAAGAGGAGGTTCG 2012 Query 104692 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 104751 ||| ||||| ||| |||||| |||||||| ||||||||||||||| | || ||| | Sbjct 2011 TGCCCGTGATCTTTTCCTCGCTCTTTGGATTCCGGATCTCTTCATGAAGCGTGTCGAGAA 1952 Query 104752 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA-TGCCGTGG 104810 | |||| | ||| | ||| | ||||| | || ||||| || |||| ||| | | Sbjct 1951 AAATGGCGAGTGGACACTCATGTGTCCTAATGAGTGCCCTGGCCTTGCCGACTGCTAT-G 1893 Query 104811 GTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTC--GGGCGACTGCGAC 104868 ||||||| ||||| || | ||| |||||||| || | ||| | |||| | || || Sbjct 1892 GTGAGGAATTTGAGGCATTGTACGAGAAGTACGA-GAGGGAGGGCAAGGGCAAGCGC-AC 1835 Query 104869 GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 104928 | ||| | | ||| | | || || || | || || |||||||||| || Sbjct 1834 CATCAAGGCTCAAAAGCTTTGGTACTCGATCCTTGAGGCACAGACTGAGACTGGTAATCC 1775 Query 104929 ATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 104988 || |||||| ||||| ||||| || |||| ||||| || || ||||| | ||| || Sbjct 1774 ATTCATGCTCTACAAGGACGCTTGCAACCGTAAGAGCAACCAGAAGAACCTTGGTACAAT 1715 Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 105048 | || ||||| || || || || ||| | || | | | | || ||| ||||| Sbjct 1714 CCGCAGCTCCAACCTTTGCACTGAGATCATCGAGTATTCTGCTCCTGACGAGGTTGCTGT 1655 Query 105049 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATG--TGGATCCAGAGACAAAGA--CA- 105103 || ||||| || || | ||||| || || | || || || | || || Sbjct 1654 TTGCAACCTTGCTTCTCTGGCTCT------GTCTGCCTTTAT-CAACTACGATGATGCAT 1602 Query 105104 --TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAG 105161 || || | | || || ||||||||||| || ||| || || |||| Sbjct 1601 GCTTCGACTTCAAGAAGCTGCACGAAGTTACCCAAGTTGTGGTTCGCAATCTCAACAAGA 1542 Query 105162 TTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACC 105218 |||| ||| ||| || || || |||| || ||||| || ||| | |||| Sbjct 1541 TTATCGATGTAAACCACTATCCTGTCCCTGAG---GCACGTAACAGCAACATGCGTCACC 1485 Query 105219 GTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCA 105277 | || || ||| |||||||||| || ||||| || | ||| || || || || | Sbjct 1484 GGCCCATCGGTGTCGGTGTTCAAGGCCTCGCTGACGCCTTCCTTGCTCTG-CGATTGCCT 1426 Query 105278 TTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCC 105337 || || || || || || |||| || || |||||||| || || ||||| Sbjct 1425 TTCGAGTCGCCTGAGGCTCGTGAGCTCAACAAGCAGATCTTTGAGACTATTTACCACGCT 1366 Query 105338 GCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGT 105397 ||| | || | ||| | || ||||||| || ||||| | || ||||| Sbjct 1365 GCTTTAACTGCATCTGTTGAGATCGCCAAGGTTGAGGGCCCATACTCGTCGTTCAAGGGT 1306 Query 105398 TCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCA 105456 || || || || |||| | || |||| ||||||| |||| || | || ||| | Sbjct 1305 TCCCCTGCCTCCGAAGGTATTCTGCAATACGATATGT-GGAACGTCAAGCCCAGCGACCT 1247 Query 105457 CTACGACTGGGA-AGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCC 105515 | |||||||| ||| |||||||| | ||||||||| | || |||| |||||||| | Sbjct 1246 GTGGGACTGGGACAGC-CTCAAGGAGCAAATCAAGGAGCATGGCATTCGCAACAGTCTGC 1188 Query 105516 TCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 105575 | | || || ||||| || ||| || |||| || | || || || || ||||||| Sbjct 1187 TGCTTGCCCCCATGCCCACTGCCAGTACATCACAGATTCTTGGCAACAACGAGTGCTTTG 1128 Query 105576 AACCCTACACGACGAACATCTA 105597 | ||||| || |||||||||| Sbjct 1127 AGCCCTATACTTCGAACATCTA 1106 >seq5020 Length=23815 Score = 145 bits (160), Expect = 9e-30 Identities = 168/224 (75%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCG 94791 ||||||| || |||| ||||| || || |||||| | |||||| ||| | |||| | Sbjct 18449 CAGTTCCCTGCATTCGCAAGAAGGCCGACTGGGCTCTCAAGTGGATTGCTGACAAGAACT 18508 Query 94792 CGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGT 94851 | | |||| | | |||| ||| | || || || |||||||||||| |||||| ||| Sbjct 18509 CAT-CCTTCGGTCAGCGCCTCGTTGCCTTCGCTGCTGTTGAGGGTATTTTCTTCAGCGGT 18567 Query 94852 TCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 94911 | ||| | || | |||||||||||||| || |||||||| |||||| |||||| Sbjct 18568 GCTTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTCACTTTCTCC 18627 Query 94912 AACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||||||||||||||||| ||||| || ||| || ||||| Sbjct 18628 AACGAGCTTATCTCTCGTGATGAGGGTCTTCACACTGACTTTGC 18671 >seq4016 Length=25323 Score = 100 bits (110), Expect = 3e-16 Identities = 183/262 (70%), Gaps = 11/262 (4%) Strand=Plus/Minus Query 9704 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 9763 ||||||||||| || ||||||| |||||| || || | ||| | | |||||||| Sbjct 9915 GCATCAATCTCGTCGATGAAGATGATGCACGGGGCGTTCTTGCGGCCTTCGGCAAAGAGA 9856 Query 9764 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG--CGGCGGAAC 9821 || || ||||| | |||||||| || ||||||||||| || | | | || || Sbjct 9855 TCGCGCACACGGGATGGTCCCACACCGACGAACATCTCCACGAACTCAGATCCGCTGACG 9796 Query 9822 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9881 | || |||||| || |||||||| ||| |||| ||||| || || ||||| | Sbjct 9795 CT--GAAGAAGGGAACGCCTGATTCACCGGCAGTGGCCTTTGCGAGCAGTGTTTTACCGG 9738 Query 9882 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCA--CTTC-CAAAGT 9938 | || || || ||||| | ||||| ||||| || || |||||| |||| | || | Sbjct 9737 TGCCAGGTGGGCCAGCGAGAATAGCACCGCGTGGGATTTTTGCGCCAAGCTTCTCGAACT 9678 Query 9939 ATCTCTCAGGTTGCTT-AAGAA 9959 ||||||| ||||| ||||| Sbjct 9677 ---TCTCAGGCTGCTTCAAGAA 9659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583218105309440