Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq3618 298 6e-76 seq3611 188 8e-43 seq629 152 6e-32 seq3571 125 8e-24 seq3781 89.7 6e-13 >seq3618 Length=19201 Score = 298 bits (330), Expect = 6e-76 Identities = 1162/1800 (65%), Gaps = 65/1800 (4%) Strand=Plus/Plus Query 79987 GCCGCCTGATCAACGGGTACCGTCACCTGAATTGGCTTGGCCTTTGCCCGCGTCCGCAGA 80046 || ||||||||||| | | | |||||| || ||| ||| |||| ||||| Sbjct 713 GCTGCCTGATCAACAG------TGAACTGAATCGGAGCGGCAGCAGCCTGCGTGCGCAGG 766 Query 80047 TAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGCTTC 80106 ||||||||||| |||||||| || |||||| || | ||||| ||| ||| Sbjct 767 TAGTACATGCCAGTCTTGAGTCCAAGCTTCCATCCTGTGAAATGCATGCTGGTGATCTTG 826 Query 80107 GCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATGAAAGCCCCA 80166 | | |||||| || |||| |||||| || ||||||||||| ||||||||| ||| Sbjct 827 CCCATGCTGGGGTCCTTCATGTGGATGTTGAGCGACTGAGACTGGTCGATGAAAGCACCA 886 Query 80167 CGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGTACGATACA-- 80224 || ||||||||||| | | |||| || | || ||||| || || |||| Sbjct 887 CGGTCTGCCGCCATCTGCACAATTTGGCGCTGAGAGATCTCCCAAACAGTCTTGTACAGG 946 Query 80225 -CCTTACGAAGCTCCTCTGGAATGTCCAGATTTTGCACACTGCCACCGTCCTTTACAATT 80283 |||| | || || || |||| | | | | || |||| || |||| Sbjct 947 GCCTTGACA---TCGTCAGGGATGTTGGGGATGTTCTGGATGGAGCCGTTCTCGGCAATG 1003 Query 80284 T---GATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAGATCTTTCACAAGGT-- 80338 | ||||||| || | ||| | |||||| | ||||| |||| || Sbjct 1004 ATGCGGTTTTTCATAGCATCTGACCAAAGACCAAGTTCAACAAGATCCTTCAGCAGCCAT 1063 Query 80339 -GCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGATACAGGTTTGTAGTG 80397 | ||| || | || |||| || || || || ||| | || | ||| | ||| Sbjct 1064 GGGTTGACAACCTGGA---ACTCGCCAGCAAGCACACGGCGCTGGTAGATGTTCGAAGTA 1120 Query 80398 TAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGG 80457 || |||||||| ||||||||| || || ||||| | || || || || ||||| ||| Sbjct 1121 TAGGGCTCAAAGCACTCGTTGTTGCCAAGAATCTGTGATGTACTGGCAGTGGGCATGGGG 1180 Query 80458 CCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCAAATCTGACCAA 80517 | | || ||| || || | ||| |||| |||||| | ||| | | ||| || | Sbjct 1181 GCAAGCAGCAGACTGTTGCGAATGCCATGCTCCTTGATTTGCTC-CTTGAGGCTGTCCCA 1239 Query 80518 AAATCAACCCCAA--CGCTG----TGACC--CCACATGTCGTGCTGCAAGATGCCCTCCG 80569 || || || ||||| |||| |||||| |||| |||| || || || | Sbjct 1240 G--TC--CCACAGGTCGCTGGGCTTGACGTTCCACATATCGTATTGCAGAATACCTTCGG 1295 Query 80570 ACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGACT 80629 | || || || ||| ||||| | ||| |||||||| |||||| | |||| || Sbjct 1296 AGGCAGGGGAACCCTTGAACGACGAGTATGGGCCCTCAACCTTGGCGATCTCAACAGATG 1355 Query 80630 CCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGTG 80689 | | | || ||||| ||||| |||||||| |||||| | | || |||| | Sbjct 1356 CAGTTAAAGCAGCGTGGTAAATAGTCTCAAAGATCTGCTTGTTGAGCTCACGAGCCTCAG 1415 Query 80690 GGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGG 80749 | ||||| | ||| | || | ||| ||||||| ||||| ||||| |||| Sbjct 1416 GCGACTCGAAAGGCAATCGCAGAGCAAGGAAGGCGTCAGCGAGGCCTTGAACACCGACAC 1475 Query 80750 CGATCGGGCGGTGGCGCTTGTTCGATCGCTCG-GCCTCCGGAATTGGGTAAAAGTTATTA 80808 |||| || ||||| ||| |||| | | || ||||| || | || || ||| | Sbjct 1476 CGATGGGCCGGTGACGCATGTT-GCTGTTACGTGCCTCAGGGACAGGATAGTGGTTTACA 1534 Query 80809 TCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAG 80868 ||||| | ||| || ||||| ||||| | ||||| || || || |||| ||| Sbjct 1535 TCGATAATCTTGTTGAGATTGCGAACCACAACTTGGGTAACTTCGTGCAGCTTCTTGAAG 1594 Query 80869 TCGAAT--TGGTTCCCC----TTCACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCAC 80922 ||||| || || | || | ||| || | || ||| || || || ||||| Sbjct 1595 TCGAAGCATGCATCATCGTAGTTGATAAAGGCAGACAGAGCCAGAGAAGCAAGGTTGCAA 1654 Query 80923 ACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTA 80982 || || ||||| |||| | | | | |||||| ||| || ||||| | || || Sbjct 1655 ACAGCAACCTCGTCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGG 1714 Query 80983 ATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTAC 81042 |||||||| ||||| |||||||| ||| ||||||||||||||||||| |||| | Sbjct 1715 ATTGTACCAAGGTTCTTCTGGTTGCTCTTACGGTTGCAAGCGTCCTTGTAGAGCATGAAT 1774 Query 81043 GGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACC 81102 || |||| ||||| ||||| || ||||| | || ||||| || | |||||| Sbjct 1775 GGATTACCAGTCTCAGTCTGTGCCTCAAGGATCGAGTACCAAAGCTTTTGAGCCTTG--- 1831 Query 81103 ACCTTGCG---GAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGCA 81159 | |||| | ||||| || | | ||||| |||| | | || || | || Sbjct 1832 ATGGTGCGCTTGCCCTTGCCCTCCCTCTCGTACTTCTCGTACAATGCCTCAAATTCCTCA 1891 Query 81160 CCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTC 81218 || | | || || | ||| | |||||||| ||||| ||||| || ||| ||| | Sbjct 1892 CCATAGCAG-TCGGCAAGGCCAGGGCACTCATTAGGACACATGAGTGTCCACTCGCCATT 1950 Query 81219 GTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCA 81278 ||||| ||| ||||||||| || || ||||| || ||| ||| || || ||| Sbjct 1951 TTTCTCGACACGCTTCATGAAGAGATCCGGAATCCAAAGAGCGAGGAAAAGATCACGGGC 2010 Query 81279 GCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATG 81338 || ||||||| | || ||||| || | ||||| || || | || ||| | || Sbjct 2011 ACGAACCTCCTCTTTGCCATGGTTCTTACGGAGATCGAGGAACTCAAAGACGTCTGAGTG 2070 Query 81339 CCATGGCTCCAGATACACGGCGATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTA 81395 ||| || || || || | ||||| | || || | |||||| |||| ||||| Sbjct 2071 CCAGGGTTCAAGGTAAATGGCGAAGGCACCAGGACGCTTATTGCCACCTTGGTCAACGTA 2130 Query 81396 ACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGT 81455 |||||||| ||| || || || | |||||| | | |||| || ||||| || Sbjct 2131 GCGGGCAGTGTTGTTGAAGACCCGGAGCATAGGCACAAGGCCATTGGAGGTGCCGTTGGT 2190 Query 81456 ACCCACGATACGCGACCCCTTGGCGCGCA--CCTTGCTGATTGAAAGACCGATGCCACCT 81513 || | || || || | || || | | || |||| || || |||||||| Sbjct 2191 GCCGGCAATGTAAGAGCCAGTAGCCCGAATTCGGTGAACATTG--AGGCCAATGCCACCA 2248 Query 81514 GACCACTTT-GAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATC 81572 | ||| ||| || ||| ||| || || | || ||||| || || || ||||| || Sbjct 2249 G-CCATTTTGGAGATCATAGCGCAAGTCTTGAGCGTGTCATAGATGCCATCAATGCTGTC 2307 Query 81573 TTTTTTCATGTCAAGCAAGAAA-CAGCTTGACATCTGAGGGCTTTTTGAG--CCGGCATT 81629 | ||||||||| | ||||||| || || | |||| |||| | | || ||||| Sbjct 2308 ATCTTTCATGTCGA-CAAGAAAGCAAGACGATAGCTGA--GCTTGAGGGGTACCAGCATT 2364 Query 81630 GAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTT 81689 ||| || || || | |||||| ||||| | | | ||||| |||| ||||| || | Sbjct 2365 GAAGAGCGTGGGTGAGGCGTGAGTGAAAAACTTGCTCGACATGAGGTTGTAGGTCTCAAT 2424 Query 81690 GACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGTACTGGGG 81749 ||||| ||||| |||||| || |||| ||| || ||||||| ||||| ||| || Sbjct 2425 AACGCGCTCAATATTGTCACCCCAGATGCCGACAGCGACGCGCATAATCATGTGCTGTGG 2484 >seq3611 Length=65567 Score = 188 bits (208), Expect = 8e-43 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| | ||||||||||| || ||||||||||||||||| | Sbjct 3737 ATGCAAATCTTCGTCAAGACTTTGACCGGCAAGACCATCACTCTTGAGGTTGAGTCGTCT 3678 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | || |||||||| |||||||| ||||| || || || Sbjct 3677 GACACTATCGACAACGTCAAGTCAAAGATTCAGGATAAGGAGGGCATTCCCCCGGATCAA 3618 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || ||||||||||| || ||||||| ||| || || | ||||| || Sbjct 3617 CAGCGCCTGATCTTCGCTGGTAAGCAGCTTGAGGATGGTCGCACTCTCTCCGACTACAAC 3558 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || |||||||| |||||| | ||||| |||||||| Sbjct 3557 ATCCAGAAGGAGTCTACTCTTCACCTAGTCCTTCGTCTCCGCGGTGG 3511 Score = 170 bits (188), Expect = 2e-37 Identities = 176/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || ||||||||||| || ||||| |||||||||||| | Sbjct 3509 ATGCAAATCTTCGTCAAGACTCTGACCGGCAAGACGATCACTCTCGAGGTTGAGTCATCT 3450 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || ||||| || |||||||| |||||||| ||||| || || || Sbjct 3449 GACACCATCGACAACGTGAAGAGCAAGATTCAGGATAAGGAGGGTATTCCACCGGATCAA 3390 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || ||||| ||||||||||| || ||||||| || || || ||| ||||| || Sbjct 3389 CAGCGCCTGATTTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACTCTGAGC-GACTACAA 3331 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || | || | |||||||| ||||| Sbjct 3330 CATCCAGAAGGAGAGTACTCTCCACTTGGTGCTCCGTCTTCGTGGTGG 3283 Score = 161 bits (178), Expect = 1e-34 Identities = 176/231 (76%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||||||||||||||| ||||||||||| || || || ||||| ||||| | Sbjct 3281 ATGCAGATCTTTGTCAAGACGCTCACCGGCAAGACCATCACCCTGGAGGTCGAGTCCAGC 3222 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| ||||| || || |||||||||||||| ||||| || || || Sbjct 3221 GACACCATTGACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCGGATCAA 3162 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || || || || ||||| | ||||||| ||| || || ||| |||||||| Sbjct 3161 CAGCGCCTGATCTTCGCCGGCAAGCAGTTGGAGGATGGTCGCACTCTGAGC-GACTATAA 3103 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| ||||| || | || | |||||||| ||||| || Sbjct 3102 CATCCAGAAGGAGAGTACTCTCCACTTGGTGCTCCGTCTTCGTGGTGGCCA 3052 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || |||||||| || ||||||||||| || || || | ||| | || | ||| | Sbjct 3941 ACTGGCAAGACCATCACTCTTGAGGTCGAATCCTCCGACACCATCGACAACGTCAAGTCA 3882 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || ||||||||||||||||| ||||| || || || ||||| || || || ||||| ||| Sbjct 3881 AAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAACAGCGCCTGATCTTCGCTGGCAAG 3822 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || ||||||| ||| ||||| | ||||| || |||| |||||||| || || || Sbjct 3821 CAGCTTGAGGATGGTCGCACCCTTTCCGACTACAACATCCAGAAGGAATCTACCCTCCAC 3762 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || || | || || || || || Sbjct 3761 CTGGTTCTCCGCCTCCGTGGCGG 3739 >seq629 Length=20836 Score = 152 bits (168), Expect = 6e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || || |||||||| || |||||||| ||||| Sbjct 19249 ATGCAGATCTTCGTGAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCTTCC 19308 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| | || || |||||||||||||| ||||| || ||||| Sbjct 19309 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAA 19368 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || || ||||| ||||| || ||||||| || ||||| ||| ||||| || Sbjct 19369 CAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGAGC-GACTACAA 19427 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || ||| | || ||||| ||||| Sbjct 19428 CATCCAGAAGGAGTCTACCCTCCACCTCGTCCTCCGCCTTCGTGGTGG 19475 >seq3571 Length=7344 Score = 125 bits (138), Expect = 8e-24 Identities = 137/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 |||||| |||||| | || |||||||| || || || ||||| ||||| || | ||| Sbjct 6308 CTTTGTTAAGACGTTAACTGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCAT 6249 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| | ||| | || || |||||||||||||| ||||| || ||||| ||||| || Sbjct 6248 CGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAACAGCGCCT 6189 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || || ||||| ||||| || ||||||| || ||||| | ||||| || |||| || Sbjct 6188 GATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAA 6129 Query 27594 GG 27595 || Sbjct 6128 GG 6127 >seq3781 Length=37141 Score = 89.7 bits (98), Expect = 6e-13 Identities = 181/269 (67%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCG 32043 || ||||| |||||| || ||||| || || || | |||| |||||| Sbjct 14049 GATGGCCTGAAGCCTGGCCAACGCAAAGTCATGTATGGTGTTTTCAAACGTAACCTGGTC 13990 Query 32044 AGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCAC 32103 | |||| |||||| | | || |||| ||||| | | ||||||| || |||||| Sbjct 13989 AAAGACAAGAAGGTTGTAGACCTCGCGGGTTACGTCTCCGGCGAAACGGCATACCACCAC 13930 Query 32104 GGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAAT 32163 || || | ||| || ||| |||||| | |||||||||||||| ||||||| | || Sbjct 13929 GGTGATGTGTCACTGCAGCAGACCATTATTGGCCTTGCTCAGAACTATGTCGGTTCGAAC 13870 Query 32164 AACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGAT 32223 ||| | |||| || || || ||| ||| || | || || || |||| ||| Sbjct 13869 AACATCAACTGCCTTGAACCCAGTGGCATGTTCGGTTCTCGTCTTCAAGGAGGCAGCGAT 13810 Query 32224 GCTGCGAGCTCCCGTTACATCTTCACCCG 32252 ||||| ||| | |||||||| | ||| || Sbjct 13809 GCTGCCAGCCCTCGTTACATTTACACGCG 13781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570268653278720