Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq3611 111 1e-19 >seq3611 Length=65567 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | |||||| | |||||| |||||||| |||||||| || |||||||| || Sbjct 3054 GCCACCACGAAGACGGAGCACCAAGTGGAGAGTACTCTCCTTCTGGATGTTATAGTCGCT 3113 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | || || | || || ||||| || || | |||||||| ||||| || Sbjct 3114 CAGAGTGCGACCATCCTCCAACTGCTTGCCGGCGAAGATCAGGCGCTGTTGATCCGGGGG 3173 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||| |||| || | || || | ||| ||||| | ||| | Sbjct 3174 AATACCCTCCTTGTCCTGGATC-TTGCTCTTCACATTGTCAATGGTGTCGCTGGACTCGA 3232 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | |||| ||| || || || ||||| | ||| || ||||| ||||||||| Sbjct 3233 CCTCCAGGGTGATGGTCTTGCCGGTGAGCGTCTTGACAAAGATCTGCATG 3282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314707137748448