Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_028657.1 Length=60919 Score E Sequences producing significant alignments: (Bits) Value seq5299 159 1e-34 seq2362 123 1e-23 >seq5299 Length=367 Score = 159 bits (176), Expect = 1e-34 Identities = 178/235 (76%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 46262 TCACCAAACCATTCACGCATCTGCTGCTCTTGCCGGGCCTTCTGCCAACCTCCAGCGCGG 46321 || || ||||| ||||||||||| ||||| |||||||||| ||||||| ||||| ||| Sbjct 365 TCGCCGAACCAATCACGCATCTGTTGCTCCATCCGGGCCTTCAGCCAACCGCCAGCTCGG 306 Query 46322 AACATGACCTGCTCGGCCTGGCCCAGGACATAACGGCCTTGCTTGGTGAATCCAGAGGAT 46381 || | ||||||||||||||||| || | || | ||| ||||| | | || Sbjct 305 AATGCTAGCTGCTCGGCCTGGCCCACCACCGTCCTACCCTTCTTCGTGAAGGCGGCAGAC 246 Query 46382 GCCCAGAGGACGCGGATGTTCGCGTCGATCAGGTGGGCATGCTCAGGGTTATGGATGCTG 46441 ||||| | || || |||||||| |||||||| ||||||||||| ||| |||||||| Sbjct 245 GCCCACATCACACGAATGTTCGCATCGATCAGATGGGCATGCTCTTCGTTGTGGATGCTA 186 Query 46442 CCGGTGTCAGCAAGGATCTCGCGCT-GAACCCAATCCCACACGCCGATAGCTGGG 46495 ||||| || || ||||||||| ||| | | ||| ||||| || || ||||||| Sbjct 185 CCGGTTTCGGCGAGGATCTCG-GCTAGGAGCCACTCCCAGACTTCGGGAGCTGGG 132 >seq2362 Length=394 Score = 123 bits (136), Expect = 1e-23 Identities = 158/215 (73%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 7279 GGTGTTAACAAAGTCATTCTGGTTGGTAACGT-CGGTGGTGACCCGGAAACCCGCTACAT 7337 || |||||||||||||| |||| || | ||| ||| || || || |||||| | Sbjct 181 GGGGTTAACAAAGTCATATTGGTCGGCA-CGTGCGGCCAGGATCCCGAGGTTCGCTACCT 239 Query 7338 GCCCAACGGCAATGCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGACAA 7397 ||| |||||||| || ||||||||| | | || || ||||| || |||| ||||| Sbjct 240 GCCTAACGGCAACGCCGTGACCAACCTGAGTCTGGCGACCAGTGAACAGTGGACCGACAA 299 Query 7398 GCAGACCGGCCAGCAACAGGAACGCGCCGAGTTCCACCGCGTGGTGTTCTTCGGTCGCCT 7457 ||||||||||||| | || |||| | ||||||||| | | ||||| | Sbjct 300 GCAGACCGGCCAGAAGGTCGAGAAGACCGAATGGCACCGCGTGTCGATGTTCGGCAAAGT 359 Query 7458 GGCGGAGATCGCCGGCGAGTACCTGCGCAAGGGTT 7492 |||||||||||||||||| |||||||||||||||| Sbjct 360 GGCGGAGATCGCCGGCGAATACCTGCGCAAGGGTT 394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194805652272832