Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_031048.1 Length=41918 Score E Sequences producing significant alignments: (Bits) Value seq2362 84.2 6e-12 >seq2362 Length=394 Score = 84.2 bits (92), Expect = 6e-12 Identities = 131/184 (71%), Gaps = 10/184 (5%) Strand=Plus/Minus Query 27008 CCTTTGCGCAGGTATTCACCAGCGATTTCCGCCAGCTTGCCGAAGAT-GACAACGCGGTG 27066 || |||||||||||||| || ||||| ||||||| |||||||| || |||| ||||||| Sbjct 392 CCCTTGCGCAGGTATTCGCCGGCGATCTCCGCCACTTTGCCGAACATCGACA-CGCGGTG 334 Query 27067 CCATTCCGTCTGCT----CTTTTGGTTCGCCTGTGGCCTTATCTTTCCACTTTTCGGTTG 27122 |||||| |||| || ||| || ||| || ||| || |||||| ||| | | Sbjct 333 CCATTCGGTCTTCTCGACCTTCTG----GCCGGTCTGCTTGTCGGTCCACTGTTCACTGG 278 Query 27123 TGGCAATGCTGAGATTGGCAACTGCGCCACCTGACGGCATGTAGCGCACTTCTGGATCGT 27182 | || | || || |||| || ||| || |||| |||||| || || ||||| | Sbjct 277 TCGCCAGACTCAGGTTGGTCACGGCGTTGCCGTTAGGCAGGTAGCGAACCTCGGGATCCT 218 Query 27183 TGCC 27186 ||| Sbjct 217 GGCC 214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134006680527360