Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09] 47 sequences; 32,403,370 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq9 159 7e-34 >seq9 Length=1624432 Score = 159 bits (176), Expect = 7e-34 Identities = 316/462 (68%), Gaps = 8/462 (2%) Strand=Plus/Plus Query 230180 AGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCA 230239 |||| ||||| |||| | |||||| |||||| | || ||| |||| ||| Sbjct 712771 AGCGCCTCGTTGCCTTCGCTGCTGTTGAGGGTATTTTCTTCAGCGGTGCTTTCGCTTCCA 712830 Query 230240 TCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCA 230299 |||| ||||| ||| || | |||||||| ||| | | || |||||| | ||| Sbjct 712831 TCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTCACTTTCTCCAACGAGCTTATCT 712890 Query 230300 GTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCTCCAGAAC 230358 ||| || |||||||| || || | | || | | || | | || | || ||||| Sbjct 712891 CTCGTGATGAGGGTCTTCA-CACCGACTTTGCCTGTCTCCTTCACTCCCACCTGAAGAAC 712949 Query 230359 AAGCTACCATTCGAGACGGTCA---AACAAATCATTACAGAAGCAGTTGAAAACGAAAAG 230415 | ||| | || ||||| | | || || || || || || | |||||||| Sbjct 712950 CGCC--CCAG-CAAGCAGGTCATTGAGGATATTATCACTGAGGCCGTGGTTTACGAAAAG 713006 Query 230416 GAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGA 230475 |||||| | ||| ||| |||| ||| ||| | ||||||||||| || ||| Sbjct 713007 GAGTTCCTCACTGATGCTCTTCCCTGTGCCCTCCTCGGCATGAACGCCACCCTCATGCAG 713066 Query 230476 CAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTAC 230535 |||||||| || ||||| || |||||| | | || || ||||| ||||||| |||||| Sbjct 713067 CAGTACATTGAGTTCGTCGCTGACCGCCTCCTCGTCGCTCTTGGCAACGAGAAGGTGTAC 713126 Query 230536 AACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTC 230595 ||||| | ||||| || | || |||||| ||| || || || |||||||||||| Sbjct 713127 AACTCCACCAACCCTTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTC 713186 Query 230596 TTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 ||||| ||||||||| |||||| |||| | ||||||| ||| Sbjct 713187 TTCGAGAAGCGTGTCGCTGACTACCAGAAGGCTGGTGTCATG 713228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823362991610