Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09] 47 sequences; 32,403,370 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq8 98.7 1e-15 >seq8 Length=2135075 Score = 98.7 bits (108), Expect = 1e-15 Identities = 204/300 (68%), Gaps = 8/300 (3%) Strand=Plus/Minus Query 145870 ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928 |||||||| || ||| | | ||| || |||||||| ||||| ||| || ||| Sbjct 2068431 ACGTAGAATTGAGCAAAC-ATGTGACAAGGCGGCAGAGCCATTTTCTTCAGATCTCTCGG 2068373 Query 145929 GTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCCTCTTGATCTCCCCTAT 145985 ||||||||||| |||| | |||| | ||| |||||| |||| | || || Sbjct 2068372 GTTCCAGGCGGAAAGGATCATTCTCCGG---TCGAATGGGTTCGTCTTCAACTGGTGGAT 2068316 Query 145986 CAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGC 146045 |||| | || || || ||||| |||||| ||| || || |||| || || || | Sbjct 2068315 CAGGCCAGCTAGTTGATCAACGCCTTGCCCCGTGTAGTCGGTTTTGGCATCAACATATTC 2068256 Query 146046 GGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTG 146105 ||| || || |||||||| || || || || || || || ||||| || ||| | || Sbjct 2068255 GGCGCCAAAATGCCTCCATTGAAAACCATATACAGGGCCAAGGTCACCAACCTCGCGATG 2068196 Query 146106 CCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC 146165 || ||| | | | ||||||| || || || || || | ||||||||||||| ||| Sbjct 2068195 GGAGAGGCCGACGCTGTCGAGGAACTCTCGTGAACCATTACCATCCCAGATCTTGAAGCC 2068136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076453329880