Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09] 47 sequences; 32,403,370 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1 352 3e-92 seq8 123 2e-23 seq6 91.5 1e-13 seq9 82.4 7e-11 >seq1 Length=5810324 Score = 352 bits (390), Expect = 3e-92 Identities = 1205/1855 (65%), Gaps = 52/1855 (3%) Strand=Plus/Minus Query 22145 GTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGAC 22204 ||||| || || |||||||| ||||| || || | |||||| | ||||| || Sbjct 2737806 GTGCGCAGGTAGTACATGCCAGTCTTGAGTCCAAGCTTCCATCCTGTGAAATGCATGCTG 2737747 Query 22205 GTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATA 22264 || | || || || || | ||||| | |||| ||||||| ||| ||||| Sbjct 2737746 GTGATCTTGCCCATGCTGGGGTCCTTCATGTGGATGTTGAGCGACTGAGACTGGTCGATG 2737687 Query 22265 AACGCTCCTCGATCGGCGGCCATATTTATCAATGTA-CGCATCGACATTTCCCATACGGT 22323 || || || || || || ||||| | | |||| | ||| || || ||||| || || Sbjct 2737686 AAAGCACCACGGTCTGCCGCCATCTGCA-CAATTTGGCGCTGAGAAATCTCCCAAACAGT 2737628 Query 22324 CTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATT 22383 ||||||||| | ||| || || || ||| |||||| ||| ||||| | Sbjct 2737627 CTTGTACAGGGCCTTGACATCGTCAGGGATGTTGGGGATGTTCTGGATGGAGCCGTTCTC 2737568 Query 22384 GTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAA----ATCTT 22439 | ||||| ||||| || | ||| ||| | ||| | | |||| ||| | Sbjct 2737567 GGCAATGATGCGGTTTTTCATAGCATCTGACCAAAGACCAA----GTTCAACAAGATCCT 2737512 Query 22440 TGACCAG--ATGACGGTTCACCACTTGAAACTCGCCGGACAAG-ACGCGGCGTTGGTAAA 22496 | | ||| ||| |||| || || || |||||||| | |||| || ||||| ||||| | Sbjct 2737511 TCAGCAGCCATG--GGTTGACAACCTGGAACTCGCCAG-CAAGCACACGGCGCTGGTAGA 2737455 Query 22497 TGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGG 22556 | || || || | || || || | || ||||| || || ||||| | || || | Sbjct 2737454 TATTCGAAGTATAGGGCTCAAAGCACTCGTTGTTGCCAAGAATCTGTGATGTACTGGCAG 2737395 Query 22557 TCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCT--TTGAAATTTTACTC-T 22613 | ||||| || || | ||| || ||| | | ||| |||| |||| ||| ||| | Sbjct 2737394 TGGGCATGGGGGCAAGCAGCAGACTGTTGCGAATGCCATGCTCCTTGA---TTTGCTCCT 2737338 Query 22614 TGAGCATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCA 22673 |||| | |||||||||||| ||| ||| | || || ||||||||||||||||| Sbjct 2737337 TGAGGCTGTCCCAGTCCCACAGGTCGCTGGGCTTGACGTT---CCACATATCGTATTGCA 2737281 Query 22674 ACACGCCGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAA 22733 | || || ||| || | | ||| ||| || || | | | ||| | Sbjct 2737280 GAATACCTTCGGAGGCAGGGGAACCCTTGAACGACGAGTATGGGCCCTCAACCTTGGCGA 2737221 Query 22734 GTTCG-CAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAAT 22792 || ||| | || || || ||| || |||||||| ||||| | |||||| | Sbjct 2737220 TCTCAACAGAT-GCAGTTAAAGCAGCGTGGTAAATAGTCTCAAAGATCTGCTTGTTGAGC 2737162 Query 22793 TCGGCGGC----GGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCAT 22848 || || |||||| ||| | |||| |||| | ||| ||||| || | Sbjct 2737161 TCACGAGCCTCAGGCGAC----TCGAAAGGCAGTCGCAGAGCAAGGAAGGCGTCAGCGAG 2737106 Query 22849 ACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACACTTT--TGCCTCGGGC 22906 || ||||| || | |||||| ||||||| || || | || |||||| || Sbjct 2737105 GCCTTGAACACCGACACCGATGGGTCGGTGACGCATGTTG--CTGTTACGTGCCTCAGGG 2737048 Query 22907 AAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATN 22966 | |||||| || |||||| | |||| | || | ||||| || || | Sbjct 2737047 ACAGGATAGTGGTTTACATCGATAATCTTGTTGAGATTGCGAACCACAACTTGGGTAACT 2736988 Query 22967 NNNNNNNNNNNNTCAAAGTCGTAA-ACGCCCGATTGTAC--AACAAACTTGTTGACGGCG 23023 | |||||| | | || || ||| || ||| | ||| | | Sbjct 2736987 TCGTGCAGCTTCTTGAAGTCGAAGCATGCATCATCGTAGTTAATAAAG--GCAGACAGAG 2736930 Query 23024 ATCGAG--GCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGG 23081 ||| ||||| ||||| || || |||||||| | | ||||| | || || | Sbjct 2736929 CCAGAGAAGCAAGGTTGCAAACAGCAACCTCGTCAGGAGCAGAATACTCGATGATCTCAG 2736870 Query 23082 TACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACG 23141 | || || ||| | || || || | || |||||||||| || || ||||| | Sbjct 2736869 TGCAAAGGTTGGAGCTGCGGATTGTACCAAGGTTCTTCTGGTTGCTCTTACGGTTGCAAG 2736810 Query 23142 AATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCC 23201 ||||||||||||||| | || | || ||||| ||| | ||| | ||||| || Sbjct 2736809 CGTCCTTGTAGAGCATGAATGGATTACCAGTCTCAGTCTGTGCCTCAAGGATCGAGTACC 2736750 Query 23202 ACATAGTCTGAGCGTGAACACGTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACA 23261 | | ||||||| | | ||| | | |||| || ||||||||| | ||||| Sbjct 2736749 AAAGCTTCTGAGCCTTGATGGTGCGCTTGCCCTTGCCCTCCCTCTCGTACTTCTCGTACA 2736690 Query 23262 ACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGA 23321 | || |||||||| |||| || |||||||| ||||| || | | | |||||||||| Sbjct 2736689 ATGCCTCAAATTCCTCACCATAGCAGTCGGCAAGGCCAGGGCACTCATTAGGACACATGA 2736630 Query 23322 GACTCCACATTG--AGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGC 23379 | ||||| | | | || ||||| || || |||| || |||||||| ||||| ||||| Sbjct 2736629 GTGTCCAC-TCGCCATTC-TTTTCGACACGCTTCATGAAGAGATCCGGAATCCAAAGAGC 2736572 Query 23380 GTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAA 23439 | ||| || || ||||| || |||||||||||||| |||||| | ||| | || Sbjct 2736571 GAGGAAAAGATCACGGGCACGAACCTCCTCTTTGCCATGGTTCTTACGGAGATCGAGGAA 2736512 Query 23440 GTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATT 23499 || || ||||| | ||||| || || ||||||| ||| || ||||| || | |||||| Sbjct 2736511 CTCAAAGACGTCTGAGTGCCAGGGTTCAAGGTAAATGGCGAAGGCGCCAGGACGCTTATT 2736452 Query 23500 GCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACC 23559 ||| || || || ||||| ||||| ||||||||| | || | ||||| ||||| || || Sbjct 2736451 GCCACCTTGGTCAACGTAGCGGGCAGTGTTGTTGAAGACCCGGAGCATAGGCACAAGGCC 2736392 Query 23560 GTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTG 23619 ||||| | |||| ||| || | || || | || |||| |||||| | Sbjct 2736391 ATTGGAGGTGCCGTTGGTGCCGGCAATGTAAGAGCCAGTAGCCCGAATTCGGTGAACATT 2736332 Query 23620 GAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGAT 23679 || || ||||| || || || || ||||| ||||| || || ||||| ||||| Sbjct 2736331 GAGGCCAATGCCACCAGCCATCTTGGAGATCATAGCGCAAGTCTTGAGCGTGTCATAGAT 2736272 Query 23680 GCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAA-CACGAAGACATTTGCGCTTTGG 23738 ||| || |||||||| ||||| | ||| ||||||| || || || | || |||| | Sbjct 2736271 GCCATCAATGCTGTCATCTTTCATGTCGA-CAAGAAAGCAAGACGATAGCTGAGCTTGAG 2736213 Query 23739 GCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGAT 23798 | ||| | || ||| || || || |||||| || || | ||||||| || | Sbjct 2736212 GGGTACCAGCATTGAAGAGCGTGGGTGAGGCGTGAGTGAAAAACTTGCTCGACATGAGGT 2736153 Query 23799 TGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCA 23858 |||| || || || || ||||| | || || || |||| ||||||||||| | Sbjct 2736152 TGTAGGTCTCAATAACGCGCTCAATATTGTCACCCCAGATGCCGACAGCGACGCGCATAA 2736093 Query 23859 TCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCA 23918 |||||| || || | ||| || | |||||| | |||| ||| ||||| || | || Sbjct 2736092 TCATGTGCTGTGGACGCTCAACAATCTTGCCGTTGAGCTTGAGCAGGTATGATCGCTCCA 2736033 Query 23919 TCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGA 23973 || || || ||||| || | ||||| || ||||| |||| ||| || || || Sbjct 2736032 GGGTCTTGAAGCCAAAGTATTGGTAGTTGAAATCACGGTCGTACACGATCGCGGA 2735978 >seq8 Length=2135075 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| |||||| |||| ||||| || ||||| | || ||||| |||| Sbjct 384918 ATGCAAATCTTCGTCAAGACTTTGACCGGCAAGACCATCACTCTTGAGGTTGAGTCGTCT 384977 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| | ||||| || ||| | ||| ||||| ||| | || || || || Sbjct 384978 GACACTATCGACAACGTCAAGTCAAAGATTCA-GGATAAGGAGGGCATTCCCCCGGATCA 385036 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||| || || ||||||||||| ||| | || || | ||| ||||||| || || Sbjct 385037 ACAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACTCTGAGCGACTACAA 385096 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || || || |||||||| || || ||| | || | || |||| Sbjct 385097 CATCCAGAAGGAGTCTACTCTTCACCTAGTCCTTCGTCTCCGCGGTGGTA 385146 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||||||||| ||||| || ||||| |||| ||||| | || Sbjct 385146 ATGCAAATCTTCGTCAAGACTCTGACCGGCAAGACAATCACTCTCGAGGTTGAGTCATCT 385205 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||| ||||| || | || || || || Sbjct 385206 GACACCATCGACAACGTGAAGAGCAAGATTCAGGATAAGGAGGGTATTCCCCCGGATCAA 385265 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || |||||||| || ||| | || || ||| ||||||| || ||| Sbjct 385266 CAGCGCCTGATTTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACTCTGAGCGACTACAAC 385325 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || ||||| || |||| || Sbjct 385326 ATCCAGAAGGAGAGTACTCTCCACTTGGTGCT 385357 >seq6 Length=2850886 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| ||||| || || || || || |||||| | || || || | Sbjct 2704131 AAGATGCAGATCTTCGTGAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCT 2704190 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||||| |||| | ||||| | || ||||||||| ||| | || || ||| Sbjct 2704191 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGAC 2704250 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 || ||||| || || ||||||||||| ||| | || || || ||||||| || Sbjct 2704251 CAACAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTAC 2704310 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || || || || || || || Sbjct 2704311 AACATCCAGAAGGAGTCTACCCTCCACCTCGTCCT 2704345 >seq9 Length=1624432 Score = 82.4 bits (90), Expect = 7e-11 Identities = 198/296 (67%), Gaps = 9/296 (3%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| ||||| || || || || ||||| | ||| ||| | || || Sbjct 712316 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAAATCGATCTC 712375 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCCTC---AAAGAATCTGA-GAGAAAT--TTTATT 57683 || |||||||| ||| ||| | || | || || ||| ||||| | || || Sbjct 712376 TCCAAGGATCTTCACGACTGGAACAACCGCCTGAACGA---TGACGAGAAGTACTTCATC 712432 Query 57684 AAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAA 57743 ||| | ||||| || ||||| || || || || || || |||||||| |||| || Sbjct 712433 TCTCACATCTTGGCTTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTGGTTGAG 712492 Query 57744 AGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCC 57803 | || ||||||||||| | ||||| | ||||| ||||| || || | Sbjct 712493 CGCTTCAGCGCCGAAGTGCAAGTCCCTGAGGCTCGCTGCTTCTACGGTTTCCAGATTATG 712552 Query 57804 ATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA 57859 || || ||| | || || || | || || || || ||||| || ||| | ||||| Sbjct 712553 ATGGAGAACATTCACTCCGAGACATACTCTCTCCTGATCGACACATACATCAAGGA 712608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766138112240