Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09] 47 sequences; 32,403,370 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1 360 5e-94 seq9 84.2 6e-11 >seq1 Length=5810324 Score = 360 bits (398), Expect = 5e-94 Identities = 1172/1792 (65%), Gaps = 64/1792 (4%) Strand=Plus/Plus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTA-TCAATGGTGATATTGTTGAACGCCCGCA 363458 ||||| ||||| ||| ||||| ||| |||| || | |||||||| || || || Sbjct 2736026 AAGACCCTGGAGCGATCATACCTG-CTCAAGCTCAACGGCAAGATTGTTGAGCGTCCACA 2736084 Query 363459 GCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGA 363518 ||| ||| | ||||| || ||| | || ||| | || |||| || ||||| Sbjct 2736085 GCACATGATTATGCGCGTCGCTGTCGGCATCTGGGGTGACAATATTGAGCGCGTTATTGA 2736144 Query 363519 AACATATAAGCTTCTAA-GTGCTCGTGTATTCACGCACGCCACGCCAACAATGTACAATG 363577 || || || || | | || || | ||||| |||||| | || || | | ||||| Sbjct 2736145 GACCTACAACCTCATGTCGAGCAAGTTT-TTCACTCACGCCTCACCCACGCTCTTCAATG 2736203 Query 363578 CTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCA 363637 |||| || | | | | ||| | || |||||||||||| | | ||||| || || || Sbjct 2736204 CTGGTACCCCTCAAGCTCAGCTATCGTCTTGCTTTCTTGTCGACATGAAAGATGACAGCA 2736263 Query 363638 TCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAA 363697 | || || |||| |||||| || |||| ||| ||| | || ||||||| || || || | Sbjct 2736264 TTGATGGCATCTATGACACGCTCAAGACTTGCGCTATGATCTCCAAGATGGCTGGTGGCA 2736323 Query 363698 TTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGCACAGGGGGA 363756 |||| | | ||| |||| || || | | ||||||| |||||| || Sbjct 2736324 TTGGCCTCAATGTTCACCGAATTCGGGCTACTGG-CTCTTACATTGCCGGCACCAACGGC 2736382 Query 363757 TACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGAC 363816 ||| ||||| || || || ||||| || || || |||| ||||| | ||||| ||| Sbjct 2736383 ACCTCCAATGGCCTTGTGCCTATGCTCCGGGTCTTCAACAACACTGCCCGCTACGTTGAC 2736442 Query 363817 CAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGAT 363876 || ||||| ||||| || || || || || || || || || || | || Sbjct 2736443 CAAGGTGGCAATAAGCGTCCTGGCGCCTTCGCCATTTACCTTGAACCCTGGCACTCAGAC 2736502 Query 363877 ATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGAT 363936 | |||||||| || || ||||| || ||| || |||||||| | ||||| |||||| Sbjct 2736503 GTCTTTGAGTTCCTCGATCTCCGTAAGAACCATGGCAAAGAGGAGGTTCGTGCCCGTGAT 2736562 Query 363937 CTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAAT 363996 || ||| || |||||| || | || | || |||||||| || || |||||| Sbjct 2736563 CTTTTCCTCGCTCTTTGGATTCCGGATCTCTTCATGAAGCGTGTCGAA------AAGAAT 2736616 Query 363997 ------TGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA-TG-TATGGGGTG 364048 ||| ||||| | || || | || || || || ||| |||| || ||||| || Sbjct 2736617 GGCGAGTGGACACTCATGTGTCCTAATGAGTGCCCTGGCCTTGCCGACTGCTATGG--TG 2736674 Query 364049 ACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAG---ACAA 364105 | || | || || | ||||| ||||| || |||||| |||| | ||| || | Sbjct 2736675 AGGAATTTGAGGCATTGTACGAGAAGTACGAGAGGGAGGGCAAGG---GCAAGCGCACCA 2736731 Query 364106 TTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCT 364165 | || |||||||| |||| | ||| | || | |||| |||||| || | || | Sbjct 2736732 TCAAGGCTCAGAAGCTTTGGTACTCGATCCTTGAGGCACAGACTGAGACTGGTAATCCAT 2736791 Query 364166 ATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTC 364225 ||| | ||||| || | |||||||| ||| ||||||| || |||||||||||| || Sbjct 2736792 TCATGCTCTACAAGGACGCTTGCAACCGTAAGAGCAACCAGAAGAACCTTGGTACAA-TC 2736850 Query 364226 AGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTA 364284 |||| |||||| || || ||||| || || || | ||||| |||||| ||| || Sbjct 2736851 CGCAGCTCCAACCTTTGCACTGAGATCATCGAGTATTCTGCTCCTGACGAGGTTGCTGTT 2736910 Query 364285 TGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATGGTAC---TTTTGAC 364338 || |||||||| || | || || | || ||| | | | |||| | | || ||| Sbjct 2736911 TGCAACCTTGCTTCTCTGGCTCTGTCTGCCTTTATTAACTACGATGATGCATGCTTCGAC 2736970 Query 364339 CACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGAC 364398 | || | || | || || ||| | || | |||||||| ||||| ||||||| Sbjct 2736971 TTCAAGAAGCTGCACGAAGTTACCCAAGTTGTGGTTCGCAATCTCAACAAGATTATCGAT 2737030 Query 364399 AAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATATGCGTCATCGCCCGA 364453 || | ||||| | ||||| || || ||| || |||||||| || || | Sbjct 2737031 GTAAACCACTATCCTGTCCCTGAGGCACGTAACAGC-----AACATGCGTCACCGACCCA 2737085 Query 364454 TTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC-AAGA-TGGCATTTGA 364511 | ||| | ||||| || ||||||||||||| || | ||||| || || | || || Sbjct 2737086 TCGGTGTCGGTGTTCAAGGCCTCGCTGACGCCTTCCT--TGCTCTGCGACTGCCTTTCGA 2737143 Query 364512 TTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAAT 364571 |||||||| ||||||| || || ||| |||||||||| || || || || || | Sbjct 2737144 GTCGCCTGAGGCTCGTGAGCTCAACAAGCAGATCTTTGAGACTATTTACCACGCTGCTTT 2737203 Query 364572 GACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCC 364631 ||||| || ||| | || || |||| ||||| | | |||| ||||| Sbjct 2737204 AACTGCATCTGTTGAGATCGCCAAGGTTGAGGGCCCATACTCGTCGTTCAAGGGTTCCCC 2737263 Query 364632 T-CTTTCGCAGGGAAAATTC--CAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATG 364688 | | | || ||| |||| || | ||| | ||||| |||| ||| | || || Sbjct 2737264 TGCCTCCGAAGG---TATTCTGCAATACGATATGTGGAACGTCAAGCCCAGCGACCTGTG 2737320 Query 364689 GAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTA 364747 | ||||||| | || | | ||| | ||| ||||||| | ||||||| || | Sbjct 2737321 GGACTGGGACAGCCTCAAGGAGCAA-ATCAAGGAGCATGGCATTCGCAACAGTCTGCTGC 2737379 Query 364748 CAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAAC 364807 || ||||||||||| || ||| ||||||| || || |||||||||||||| || | Sbjct 2737380 TTGCCCCCATGCCCACTGCCAGTACATCACAGATTCTTGGCAACAACGAGTGCTTTGAGC 2737439 Query 364808 CGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATA 364867 | | ||| ||| | || ||||| || ||| | || || || | ||| || || Sbjct 2737440 CCTATACTTCGAATATCTACCAGCGCCGTGTGCTTGCTGGCGAGTTCCAGGTTGTCAACC 2737499 Query 364868 AGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATA 364927 | || | ||||||||| || | || || ||| || ||||| ||| | Sbjct 2737500 CATGGCTGCTGAAGGATCTTGTTGAACTTGGTCTTTGGTCAGATGCTATGAAAAACCGCA 2737559 Query 364928 TCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTA 364987 |||| |||| || || || | |||||||| || | || || ||| | ||| | Sbjct 2737560 TCATTGCCGAGAACGGCTCCATCCAGAACATCCCCAACATCCCTGACGATGTCAAGGCCC 2737619 Query 364988 TTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTG---ATATGGCGGCCGATC 365044 | ||||| || || ||||| ||||| ||| | |||| | |||||||| || | Sbjct 2737620 TGTACAAGACTGTTTGGGAGATTTCTCAGCG---CCAAATTGTGCAGATGGCGGCAGACC 2737676 Query 365045 GCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCG 365104 | |||||||| ||| ||| |||||| | ||| | ||||| | || | | | Sbjct 2737677 GTGGTGCTTTCATCGACCAGTCTCAGTCGCTCAACATCCACATGAAGGACCCCAGCATGG 2737736 Query 365105 CCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 |||| | || |||||||||| || ||||| || || ||||| || Sbjct 2737737 GCAAGATCACCAGCATGCATTTCACAGGATGGAAGCTTGGACTCAAGACTGG 2737788 >seq9 Length=1624432 Score = 84.2 bits (92), Expect = 6e-11 Identities = 147/211 (70%), Gaps = 5/211 (2%) Strand=Plus/Plus Query 22438 AATAAGGCAGATTGGGCGCTGAAATGGATGA---ACAATGAACGT-TCATTCGCGGAACG 22493 || ||||| || ||||| || || ||||| |||| |||| || |||| | || Sbjct 712716 AAGAAGGCCGACTGGGCTCTCAAGTGGATTGCTGACAA-GAACTCATCCTTCGGTCAGCG 712774 Query 22494 TCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTT 22553 || |||| || |||| ||||| || |||||||| || || || | | ||||| Sbjct 712775 CCTCGTTGCCTTCGCTGCTGTTGAGGGTATTTTCTTCAGCGGTGCTTTCGCTTCCATCTT 712834 Query 22554 TTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCG 22613 ||||| || || |||| | ||||| ||||| || || || || ||| | || || Sbjct 712835 CTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTCACTTTCTCCAACGAGCTTATCTCTCG 712894 Query 22614 AGATGAGGGTCTTCATACCGATTTTGCGTGT 22644 |||||||||||||| ||||| ||||| ||| Sbjct 712895 TGATGAGGGTCTTCACACCGACTTTGCCTGT 712925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352815136754