Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09] 47 sequences; 32,403,370 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq9 109 4e-19 >seq9 Length=1624432 Score = 109 bits (120), Expect = 4e-19 Identities = 198/288 (69%), Gaps = 4/288 (1%) Strand=Plus/Minus Query 6200 GTTCTACCGCTACAAAATGCCGCGCATCTGCG--CCAAGGTCGAGGGTAAGGGAAACGGT 6257 |||||||||||||| ||| | || ||||| | ||| |||| || |||||||||||| Sbjct 779435 GTTCTACCGCTACAGGATG--GAGCCTCTGCAGACGAAGATCGAAGGAAAGGGAAACGGT 779378 Query 6258 ATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACC 6317 || || ||||||||||||||| ||||| |||||| || | |||| || || | Sbjct 779377 ATCAAGACCGTCATTGTCAACTTGCCTAGCGTCGCTCAGTCCCTCGAGCGACCCCGTAAG 779318 Query 6318 TACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAAC 6377 | | ||||||||||| | || || || || ||| | || | || ||| Sbjct 779317 TGGATCATCAAATATTTCGGCTTTGAGCTCGGTGCCACGACTCCAGAGGACAAGAAGAAC 779258 Query 6378 GAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGC 6437 || || | ||| | ||||| | || | |||| |||||||| ||| | || || ||| Sbjct 779257 GATCGTTGGATCATCAACGGGGCCCACGAAGCTGCGAAGCTGCAAGACCTTCTCGATGGC 779198 Query 6438 TTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACC 6485 || || |||||||| ||||| | || ||| ||||| |||||| Sbjct 779197 TTCATCAAGAAGTTTGTTCTGTGCCCGGCTTGCCGCAACCCTGAGACC 779150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334947008138057