Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09] 47 sequences; 32,403,370 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1 262 7e-65 seq9 259 9e-64 >seq1 Length=5810324 Score = 262 bits (290), Expect = 7e-65 Identities = 1202/1873 (64%), Gaps = 69/1873 (4%) Strand=Plus/Minus Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800 ||||||| | || ||| | || |||| || | ||||||||||||||| |||||||||| Sbjct 2737835 TGAACTGAATCGGAGCGGCAGCAGCCTGCGTGCGCAGGTAGTACATGCCAGTCTTGAGTC 2737776 Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860 || ||| | || |||||| || | ||| ||| ||| ||| || Sbjct 2737775 CAAGCTTCCATCCTGTGAAATGCATGCTGGTGATCTTGCCCAT-----GCT--GGG--GT 2737725 Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920 ||| || || |||||| ||||| |||||||| ||| | | || ||||| | Sbjct 2737724 CCTT---CATGTGGATGTTGAGCGACTGAGACTGGTCGATGAAAGCACCACGGTCTGCCG 2737668 Query 243921 CCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGT 243980 |||| | | | |||||| ||||| | | |||||||| | || ||||| | Sbjct 2737667 CCATCTGCACAATTTGGCGCTGAGAAATCTCCCAAACAGTCTTGTACAGGGCCTTGACAT 2737608 Query 243981 GCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCA 244040 || |||| ||||||||| | ||||| || | | | |||| || | || Sbjct 2737607 CGTCAGGGATGTTGGGGATGTTCTGGATGGAGCCGTTCTCGGCAATGATGCGGTTTTTCA 2737548 Query 244041 TGTTATCGTTCCACAGGCCCAAGCGCTCCA-GCGCCTCGACCAGGTGCCTGTTCACCACC 244099 | ||| ||| || || ||| | || | ||| | ||| ||| || ||| Sbjct 2737547 TAGCATCTGACCAAAGACC-AAGTTCAACAAGATCCTTCAGCAGCCATGGGTTGACAACC 2737489 Query 244100 TGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTT-GCTGCTGAGCGGCTCGATGCT 244158 || ||||| || | ||||| ||||||||||||| || | | || ||||| | || Sbjct 2737488 TGGAACTCGCCAGCAAGCACACGGCGCTGGTAGATATTCGAAGTATAG-GGCTCAAAGCA 2737430 Query 244159 CTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACT 244218 ||| ||||||| || ||||| | || || ||||| |||||||| | | ||||||||| Sbjct 2737429 CTCGTTGTTGCCAAGAATCTGTGATGTACTGGCAGTGGGCATGGGGGCAAGCAGCAGACT 2737370 Query 244219 GTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGA 244278 ||| | | ||| ||| || ||| | |||| || ||||||||||| Sbjct 2737369 GTTGCGAATGCCATGCTCCTTGATTTGCTCCTTGAGGCTGTCCCAGTCCCACA------- 2737317 Query 244279 GAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCT 244338 |||| | | |||| | |||||| || | ||||| | || | | | | ||| Sbjct 2737316 --GGTCGCTGGGCTTGACGTTCCACATATCGTATTGCAGAATACCTTCGGAGGCAGGGGA 2737259 Query 244339 GCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTA-CAGCTCTCGTCGAGGG 244397 |||| | | | || ||| || || || || ||| | || | ||| | || | | Sbjct 2737258 ACCCTTGAACGACGAGTATGGGCCCTCAACCTTGGCGATCTCAACAGATGCAGTTAAAG- 2737200 Query 244398 CGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTT-GCCGCAGGTG 244456 | |||| ||| || ||||| |||||| |||||| | || || |||| | || | | Sbjct 2737199 CAGCGTGGTAAATAGTCTCAAAGATCTGCTTGTTGAGCTCACGAGCCTCAGGCG-ACTCG 2737141 Query 244457 AAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGT 244516 || || | | || | |||| |||| || || || || || |||| ||||||||| Sbjct 2737140 AAAGGCAGTCGCAGAGCAAGGAAGGCGTCAGCGAGGCCTTGAACACCGACACCGATGGGT 2737081 Query 244517 CTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACC 244576 | ||| ||| ||||| | || || || || || || ||| | ||||| | | Sbjct 2737080 CGGTGACGCATGTTGCTGTTACGTGCCTCAGGGACAGGATAGTGGTTTACATCGATAATC 2737021 Query 244577 TTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCG 244636 |||||||| ||||| | | || || ||| |||| || |||||| | | Sbjct 2737020 TTGTTGAGATTGCGAACCACAACTTGGGTAACTTCGTGCAGCTTCTTGAAGTCGAA---G 2736964 Query 244637 TAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTG 244696 | | ||| ||| | || | | ||| | || || | || |||||| Sbjct 2736963 CATGCATCATCG----TAGTTA-----ATAAAGGCAGACAGAGCCAGAGAAGCAAGGTTG 2736913 Query 244697 CAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCAC 244756 || || || ||||| || | | |||| || ||||| ||||| ||||| || Sbjct 2736912 CAAACAGCAACCTCGTCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTG 2736853 Query 244757 TTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATG 244816 ||| || || |||| || || ||| ||| |||||| |||||||||||||||||| Sbjct 2736852 CGGATTGTACCAAGGTTCTTCTGGTTGCTCTTACGGTTGCAAGCGTCCTTGTAGAGCATG 2736793 Query 244817 AAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTG 244876 || || || ||||| ||| || | |||| || ||| || | | ||||||| Sbjct 2736792 AATGGATTACCAGTCTCAGTCTGTGCCTCAAGGATCGAGTACCAAAGCTTCTGAGCCTTG 2736733 Query 244877 ACCGTCCTGCGAGCC-TTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGG 244935 | || | || ||| |||||||| |||||| ||||| ||||| || || Sbjct 2736732 ATGGTGC-GCTTGCCCTTGCCCTCCCTCTCGTACTTCTCGTACAATGCCTCAAATTCCTC 2736674 Query 244936 GCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCC 244995 || || ||| | ||||| |||||| || |||||||| |||||||||| Sbjct 2736673 ACCATAGCAGTCGGCAAGGCCAGGGCACTCATTAGGACACATGAGTGTCCACTCGCCATT 2736614 Query 244996 GTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGT 245055 | | ||| | || ||||||||| || || ||||| || || |||| || || | || Sbjct 2736613 CTTTTCGACACGCTTCATGAAGAGATCCGGAATCCAAAGAGCGAGGAAAAGATCACGGGC 2736554 Query 245056 CCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTG 245115 | ||| || |||| |||||| | || || | || ||||||||||| ||| Sbjct 2736553 ACGAACCTCCTCTTTGCCATGGTTCTTACGGAGATCGAGGAACTCAAAGACGTCTGAGTG 2736494 Query 245116 CCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCAT 245175 |||||| || | ||| | |||| |||||| || ||||| ||||| || ||||| || Sbjct 2736493 CCAGGGTTCAAGGTAAATGGCGAAGGCGCCAGGACGCTTATTGCCACCTTGGTCAACGTA 2736434 Query 245176 CCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGG 245234 | | || | |||||||| || || ||||||| | ||| || ||| |||||||| Sbjct 2736433 GCGGGC-AGTGTTGTTGAAGACCCGGAGCATAGGCACAAGGCCATTGGAGGTGCCGTTGG 2736375 Query 245235 TGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT----GCCTAGTCCG 245290 |||| ||||| | ||| | ||| || | | ||| |||| ||| | || Sbjct 2736374 TGCCGGCAATGTAAGAGCCAGTAGCCC-GAATTCGGTGA---ACATTGAGGCCAATGCCA 2736319 Query 245291 CCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTG 245350 || || ||||||||| | ||||| |||||| ||||| ||||| || |||||| Sbjct 2736318 CCAGCCATCTTGGAGATCATAGCGCAAGTCTTGAGCGTGTCATAGATGCCATCAATGCTG 2736259 Query 245351 TCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTG-GGGCTGCACGAGTT 245409 || ||||||| || |||||||| || || |||| | ||||| ||| | | | || Sbjct 2736258 TCATCTTTCATGTCGACAAGAAAGCAAGACGATAGCT-GAGCTTGAGGGGTACCAGCATT 2736200 Query 245410 GAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGAG 245469 ||| || ||||| |||||| || || | |||||| | || ||| |||| | Sbjct 2736199 GAAGAGCGTGGGTGAGGCGTGAGTGAAAAACTTGCTCGACATGAGGTTGTAGGTCTCAAT 2736140 Query 245470 CA-GAGCGTCGATGTTGTCGCCGTGGAT--CTGCAG-GGCGCACCTCATGAGGGTGTGCT 245525 | | || || || ||||| || ||| | ||| | ||| | | || | |||||| Sbjct 2736139 AACGCGC-TCAATATTGTCACCCCAGATGCCGACAGCGACGCGCATAATCA---TGTGCT 2736084 Query 245526 G-GGGCG-TC-TCGATGGGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCT 245582 | || || || | || || | | | |||||||| ||| || ||||| || |||| Sbjct 2736083 GTGGACGCTCAACAATCTTGCCGTTGAG---CTTGAGCAGGTATGATCGCTCCAGGGTCT 2736027 Query 245583 TGAACCCAAAGTA 245595 |||| |||||||| Sbjct 2736026 TGAAGCCAAAGTA 2736014 >seq9 Length=1624432 Score = 259 bits (286), Expect = 9e-64 Identities = 607/910 (67%), Gaps = 76/910 (8%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| |||||| |||||||| || || || Sbjct 712316 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAAATCGATCTC 712375 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA--GA--ACGAAAAGTTTTTCCTCAA 42415 ||||||| || |||| | || | |||| || |||| |||| ||| || Sbjct 712376 TCCAAGGATCTTCACGACTGGAACA-ACCGCCTGAACGATGACGAGAAGTACTTCATCTC 712434 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 |||| |||| |||||||| |||||||||||||| ||||| |||||||||| | Sbjct 712435 TCACATCTTGGCTTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTGGTTGAGCG 712494 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 |||| || ||||| | |||||| |||||||||||||| |||||||| || Sbjct 712495 CTTCAGCGCCGAAGTGCAAGTCCCTGAGGCTCGCTGCTTCTACGGTTTCCAGATTATGAT 712554 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595 |||||| | ||||| ||| ||| | ||| || |||| |||||| ||| | || Sbjct 712555 GGAGAACATTCACTCCGAGACATACTCTCTCCTGATCGACACATACATCAAGGAACA-GT 712613 Query 42596 CG-AGCGTAACGGGCTGTTCAAGGCCATGGAGA---------------------CGA--- 42630 | |||||| || ||||| ||||| || | ||| Sbjct 712614 CTCAGCGTACTTATCTCTTCAACGCCATTGACACCAGTGAGTATTGCCATTACCCGAATC 712673 Query 42631 ----------------------------TGCCCTGCATCAAGAAGAAGGCGGACTGGGCG 42662 | |||||||| |||||||| |||||||| Sbjct 712674 ACCTGACGTAGTCACTAATATCCTCCAGTTCCCTGCATTCGCAAGAAGGCCGACTGGGCT 712733 Query 42663 CTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGC 42721 ||||| ||||| | | | || | || | ||||| || | || || ||||| | || Sbjct 712734 CTCAAGTGGATTGCT-GACAAGAACTCATCCTTCGGTCAGCGCCTCGTTGCCTTCGCTGC 712792 Query 42722 CGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGG 42780 || ||||| || |||||| || || ||||| |||||||||||||||||| || || Sbjct 712793 TGTTGAGGGTATTTTCTTCAGCGGTGCTTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGG 712852 Query 42781 TGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATA 42840 || ||||| || ||||| ||||| ||||| || ||| | || ||||| || || | Sbjct 712853 CCTC-ATGCCTGGTCTCACTTTCTCCAACGAGCTTATCTCTCGTGATGAGGGTCTTCACA 712911 Query 42841 GGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGG 42900 ||||||||||| ||||| ||| |||||| | | || |||| | | ||| || Sbjct 712912 CCGACTTTGCCTGTCTCCTTCACTC---CCACCTGAAGAAC-CGCCCCAGCA--AGCAGG 712965 Query 42901 TC---CGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGC 42957 || || || ||||| |||||||||| ||| |||||||||||||| | | | Sbjct 712966 TCATTGAGGATATTATCACTGAGGCCGTGGTTTACGAAAAGGAGTTCCTCACTGATGCTC 713025 Query 42958 TGCCC-GTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTC 43016 | ||| ||| |||| ||||||||||| | ||||||| ||||||| ||| |||| Sbjct 713026 TTCCCTGTG-CCCTCCTCGGCATGAACGCCACCCTCATGCAGCAGTACATTGAGTTCGTC 713084 Query 43017 GCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTT 43075 || |||| ||||| || | ||| || | | |||||| | | ||| || Sbjct 713085 GCTGACCGCCTCCTCGTCGCTCTTGGCAACGAGAAG-GTGTACAACTCCACCAACCCTTT 713143 Query 43076 CGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGC 43135 |||||| |||||||||||||| ||| |||||||||||||| ||||||||||| ||||| Sbjct 713144 CGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGC 713203 Query 43136 CGACTACCAG 43145 ||||||||| Sbjct 713204 TGACTACCAG 713213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338645200720