Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09]
47 sequences; 32,403,370 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq9 125 2e-23
>seq9
Length=1624432
Score = 125 bits (138), Expect = 2e-23
Identities = 179/252 (71%), Gaps = 0/252 (0%)
Strand=Plus/Plus
Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561
|| ||||| || || || | |||||||||| ||| | || ||| |||| ||
Sbjct 712977 ATTATCACTGAGGCCGTGGTTTACGAAAAGGAGTTCCTCACTGATGCTCTTCCCTGTGCC 713036
Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621
|| | ||||||||| | |||||| |||||||| || ||||| || |||||| |
Sbjct 713037 CTCCTCGGCATGAACGCCACCCTCATGCAGCAGTACATTGAGTTCGTCGCTGACCGCCTC 713096
Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681
|| |||| ||||| | ||||| ||||||||||||| ||||| || | ||| ||||||
Sbjct 713097 CTCGTCGCTCTTGGCAACGAGAAGGTGTACAACTCCACCAACCCTTTCGACTTCATGGAG 713156
Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741
||| || || || || || ||||||||||| ||||||||| ||| || ||
Sbjct 713157 AACATCTCCCTGGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGCTGACTACCAGAAG 713216
Query 243742 CCTGGTGTGATG 243753
||||||| |||
Sbjct 713217 GCTGGTGTCATG 713228
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102879335859450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |