Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09] 47 sequences; 32,403,370 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq9 125 2e-23 >seq9 Length=1624432 Score = 125 bits (138), Expect = 2e-23 Identities = 179/252 (71%), Gaps = 0/252 (0%) Strand=Plus/Plus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 || ||||| || || || | |||||||||| ||| | || ||| |||| || Sbjct 712977 ATTATCACTGAGGCCGTGGTTTACGAAAAGGAGTTCCTCACTGATGCTCTTCCCTGTGCC 713036 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || | ||||||||| | |||||| |||||||| || ||||| || |||||| | Sbjct 713037 CTCCTCGGCATGAACGCCACCCTCATGCAGCAGTACATTGAGTTCGTCGCTGACCGCCTC 713096 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 || |||| ||||| | ||||| ||||||||||||| ||||| || | ||| |||||| Sbjct 713097 CTCGTCGCTCTTGGCAACGAGAAGGTGTACAACTCCACCAACCCTTTCGACTTCATGGAG 713156 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741 ||| || || || || || ||||||||||| ||||||||| ||| || || Sbjct 713157 AACATCTCCCTGGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGCTGACTACCAGAAG 713216 Query 243742 CCTGGTGTGATG 243753 ||||||| ||| Sbjct 713217 GCTGGTGTCATG 713228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879335859450