Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09] 47 sequences; 32,403,370 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq9 143 3e-29 seq6 129 6e-25 seq2 120 3e-22 seq8 118 1e-21 >seq9 Length=1624432 Score = 143 bits (158), Expect = 3e-29 Identities = 200/277 (72%), Gaps = 5/277 (2%) Strand=Plus/Minus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 ||| |||||||| ||| || || | || ||||| | ||||||||| || || || Sbjct 712600 GTATGTGTCGATCAGGAGAGAGTATGTCTCGGAGTGAATGTTCTCCATCATAATCTGGAA 712541 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGAT 133285 ||||| ||||| || ||||| || |||||||| | || ||| ||||| ||||| | Sbjct 712540 ACCGTAGAAGCAGCGAGCCTCAGGGACTTGCACTTCG-GCGCTGAAGCGCTCAACCAGGT 712482 Query 133286 TTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGC 133345 | ||||||||||||||||| ||| ||||| || |||| | ||| |||||| | Sbjct 712481 TCTCGTTGACGATGCCGTCAGAGGCAGCGAAGAAAGCCAAGATGTGAGAGATGAAGTACT 712422 Query 133346 GCTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCT 133402 ||||| ||||||| ||| | ||||||| | |||||||| || || | |||| Sbjct 712421 TCTCGTCATCGTTCAGGCGGTTGTTCCAGTCGTGAAGATCCTTGGAGAGATCGATTTCCT 712362 Query 133403 CGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 || | ||||| || || |||||||| || |||||||| Sbjct 712361 CGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACAT 712325 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAG 132954 || ||||||||| || | ||||| || | || || || |||||| |||||| | Sbjct 712924 CAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTGAGA 712865 Query 132955 CCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAG 133014 || ||||||||||| || || |||||||| || |||| |||||| || ||||| Sbjct 712864 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCGAAAGCACCGCTGAAGAAA 712805 Query 133015 ACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACG-TGGCTTCTTTGCTGGC 133073 | ||||| || || ||||| || || ||||||| ||||| | || ||| ||| || Sbjct 712804 ATACCCTCAACAGCAGCGAAGGCAACGAGGCGCTGACCGAAGGATGAGTTC-TTGTCAGC 712746 Query 133074 GATCCAGCGCAGCGCCCATTCGGCCTT 133100 ||||| || ||||| |||||||| Sbjct 712745 AATCCACTTGAGAGCCCAGTCGGCCTT 712719 >seq6 Length=2850886 Score = 129 bits (142), Expect = 6e-25 Identities = 147/195 (75%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || |||||||| || || |||||| | || || ||| | Sbjct 2704131 AAGATGCAGATCTTCGTGAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCT 2704190 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||||| | | | |||| | || || |||| ||||| ||||| |||||| | || Sbjct 2704191 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGA 2704249 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||||||||| || || | ||| ||||| ||||| || || | |||||||| | |||||| Sbjct 2704250 CCAACAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTA 2704309 Query 38420 CAACATCCAAAAGGA 38434 ||||||||| ||||| Sbjct 2704310 CAACATCCAGAAGGA 2704324 >seq2 Length=4113143 Score = 120 bits (132), Expect = 3e-22 Identities = 135/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 || || || ||| | || ||||| ||||||||| |||| |||||| || | |||| | | Sbjct 379989 TTTGTTAAGACGTTAACTGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATC 379930 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| ||||| |||||| | ||||||||||| || Sbjct 379929 GACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAACAGCGCCTG 379870 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| ||||| ||||| || || | ||||||||| ||||||||||||||| ||| Sbjct 379869 ATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAG 379810 Query 38433 G 38433 | Sbjct 379809 G 379809 >seq8 Length=2135075 Score = 118 bits (130), Expect = 1e-21 Identities = 159/218 (73%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| || ||||| |||| || ||| | | Sbjct 385146 ATGCAAATCTTCGTCAAGACTCTGACCGGCAAGACAATCACTCTCGAGGTTGAGTCATCT 385205 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | |||| || || | || || ||||| |||||| | || | Sbjct 385206 GACACCATCGACAACG--TGAAGAGCAAGATTCAGGATAAGGAGGGTATTCCCCCGGATC 385263 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| || |||| ||| || || ||||| || || | ||||| || | |||||||| Sbjct 385264 AACAGCGCCTGATTTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACTCTGAGCGACTACA 385323 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||| ||||| || || || |||||||| ||| Sbjct 385324 ACATCCAGAAGGAGAGTACTCTCCACTTGGTGCTCCGT 385361 Score = 113 bits (124), Expect = 5e-20 Identities = 143/194 (74%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324 |||| ||||| |||||||| | || ||||| || |||||| | | | |||| | || Sbjct 384712 TCACTGGCAAGACCATCACTCTTGAGGTCGAATCCTCCGACACCATCGACAACG-TCAAG 384770 Query 38325 GAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGC 38384 ||| || | ||||| ||||| |||||| | || |||||||| || || | ||| ||| Sbjct 384771 TCAAAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAACAGCGCCTGATCTTCGCTGGC 384830 Query 38385 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTG 38444 || ||||| || || | |||||||| ||||||||||||||| |||||| | || || Sbjct 384831 AAGCAGCTTGAGGATGGTCGCACCCTTTCCGACTACAACATCCAGAAGGAATCTACCCTC 384890 Query 38445 CATTTGGTGCTGCG 38458 || |||| || || Sbjct 384891 CACCTGGTTCTCCG 384904 Score = 100 bits (110), Expect = 3e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || | || ||||| |||||||| | || || ||| | | Sbjct 384918 ATGCAAATCTTCGTCAAGACTTTGACCGGCAAGACCATCACTCTTGAGGTTGAGTCGTCT 384977 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || ||| || | || || ||||| |||||| | || || Sbjct 384978 GACACTATCGACAACG-TCAAGTCAAAGATTCAGGATAAGGAGGGCATTCCCCCGGATCA 385036 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| || || | ||| ||||| ||||| || || | ||||| || | ||||||||| Sbjct 385037 ACAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACTCTGAGCGACTACAA 385096 Query 38423 CATCCAAAAGGA 38434 |||||| ||||| Sbjct 385097 CATCCAGAAGGA 385108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172506148480