Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09] 47 sequences; 32,403,370 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq5 242 5e-59 >seq5 Length=3145821 Score = 242 bits (268), Expect = 5e-59 Identities = 479/704 (68%), Gaps = 10/704 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| ||||||||||| | ||| || || || || || | ||||| || |||||||| Sbjct 1557913 TCGAAGTCTTCACCACCGAGGTGAGTGTCGCCAGCAGTGGACTTGACCTCGAAGATACCC 1557854 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | | |||||||| || || |||||||| || || || ||||| ||| Sbjct 1557853 TCCTCAATGGTCAGGAGGGAAACATCGAAGGTGCCACCACCAAGATCGAAGATGAGGACG 1557794 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || ||||| || |||||||| || || || || || || || || Sbjct 1557793 TTGCGCTCGCCCTCAACCTTCTTGTCAAGACCGTAGGCAATGGCGGCGGCAGTGGGCTCG 1557734 Query 7637 TTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || ||||| || ||| ||||||||||| || | || || || || || || || Sbjct 1557733 TTGATGATACGGAGGACA-TTCAGGCCAGCGATGAGACCGGCGTCCTTGGTAGCCTGACG 1557675 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || || ||||| |||||||| || || || ||||| |||| |||| | ||||| Sbjct 1557674 CTGAGAGTCGTTGAAGTAGGCAGGAACGGTGACGACAGCGTTGTTGACAGTGCCGCCGAG 1557615 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 || | || ||| | || ||| ||||| |||||||| || || ||||| || | | Sbjct 1557614 GTAAGCCTCAGCGGTCTCACGCATCTTGGTGAGAACCATGGAGGAGATCTCCTCGGGTGT 1557555 Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGC-AGCACCGG 7874 || || || ||||| || || || || || || | ||| || || | | | Sbjct 1557554 GAAGGTCTTGGTCTCACCCTTGAACTCGACCTCGATGACGGGCTT----GCTACCCTTGT 1557499 Query 7875 GGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTC 7934 || || ||| | | | | ||||||||| | ||||||| | | || ||||| | Sbjct 1557498 CGACAATCTTGAAGGGGAAGTGCTTCATATCGGCCTGGACCTCTGGATCGCTGAACTTGC 1557439 Query 7935 TTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCT 7994 || || |||||||| ||||| || || ||||| | ||||||||||| ||||| | Sbjct 1557438 GGCCAATGAGACGCTTGGCATCGAAGACAGTGTTCTGAGGGTTCATGGCGACCTGGTTTT 1557379 Query 7995 TCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCG 8054 | || || || ||||| | ||| || | || || || |||||| | || || || | Sbjct 1557378 TTGCGGCATCACCGATCAAACGCTC---GGTGTCGGTGAAAGCGACGAAGGAGGGTGTGG 1557322 Query 8055 TTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGC 8114 | || || || |||||||| ||||| || || || || | | ||| || |||| Sbjct 1557321 TACGGTTACCCTGGTCGTTGGCAATGATATCGCATCGATCCTCGCGGAAGATACCCACGC 1557262 Query 8115 ACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCATT 8158 | || ||||| || || | ||| ||||||| || ||| |||| Sbjct 1557261 AGGAGTACGTGGTACCCAGATCGATACCGACGGCGGGAGCCATT 1557218 Score = 118 bits (130), Expect = 1e-21 Identities = 537/850 (63%), Gaps = 25/850 (3%) Strand=Plus/Minus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 |||||||| || || ||||| || ||||| | ||| ||||| || || || || Sbjct 1558866 TCATCTTCCTCCTTGTACTTCTCAGCATCAGCAAGCATGCGCTCAATCTCCTCCTTGGAC 1558807 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| ||||| || || |||||| | ||| || || | | |||| || | Sbjct 1558806 AGGCGACCCTTGTCATTGGTGATGACAATCTTGTTGGACTTGCCGGTGCCCTTCTCAACG 1558747 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 ||| || |||| ||||| || ||||||| |||||| | || | ||| || || | Sbjct 1558746 GCAGAGACGTTCAGGATACCGTTGGCATCAAGATCGAAAGTGACCTCAATCTGAGGGACA 1558687 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | || || | |||||||| || | || || | || || | |||| ||| | Sbjct 1558686 CCACGAGGAGCAGGCGGAATACCAGTGAGCTCGAACTTGCCGAGGAGGTTGTTGTCCTTG 1558627 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATT--GTCACCGCAGGTTGATTATCTTGTG 6866 | || ||| || || || | || | || | ||||| || || ||||| Sbjct 1558626 GTGCGCTGACGCTCGCCCTCGAAAACCTGGATAAGGACACCG--GGCTGGTTATCGGAGA 1558569 Query 6867 CCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGG 6926 || ||||||| | | ||||| | || || || || || | || || | | || Sbjct 1558568 AGGTGGAGAAGACCTCAGCCTTCTTGGTGGGGATAGTGGTGTTGCGGGGGATGAGCTTGG 1558509 Query 6927 TCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACA 6986 |||| || ||||| ||| |||| || | || || | | || || ||| | || Sbjct 1558508 TCATCATGCCACCAGCAGTCTCGATACCCATGGAGAGGGCAGCGACATC---GAGAAGCA 1558452 Query 6987 GG-TCTTGAACAGATTCGTTCCCTT-----------CACCCGTTAAGATGGCGGCTTGGA 7034 || ||| | || || ||| |||| | | ||||| || |||| Sbjct 1558451 GGATCTCG------TTGGTGGACTTGGAAGAAGTGTCACCGGAGAGAATGGCAGCCTGGA 1558398 Query 7035 CCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGT 7094 | | || || || ||||| |||||||||||||| || | || | || || |||| Sbjct 1558397 CGGCGGCACCATAGGCGACGGCCTCATCGGGGTTGATGGAGCGGTTGGGCTCCTTGCCGT 1558338 Query 7095 TAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAA 7154 | || || || | | | | || | ||||| || || || |||||||| | | Sbjct 1558337 TGAAGTAGTCGGTAATGAGCTTCTGGACACGGGGGATACGGGTGGAACCACCGACGAGGA 1558278 Query 7155 CGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTT 7214 |||| || | || | || |||||||| | || | || || ||||| | Sbjct 1558277 CGATCTCGTGAACCTGGCTCTTGTCGATCTTGGCATCACTGAGGACACGGTCCACAGGCT 1558218 Query 7215 CCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATG 7274 || |||||| | ||| || || ||||| || || |||||||| || || | Sbjct 1558217 GGATGGTAGAACGGAAAAGATCCTGGCAAAGCTCCTCGAAGCGGGCACGGGTGATTGAGG 1558158 Query 7275 TATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAG 7334 | ||||| || | ||| ||| | | |||||||| |||||||| || || || | |||| Sbjct 1558157 TGTAGAAGTCGATGCCCTCGAAGAGAGAATCAATCTCAATGGTAGTCTGAGCGGAGGAAG 1558098 Query 7335 ATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTAC 7394 | | || ||||| || ||||| || || || || | ||| ||||||||||| | ||| Sbjct 1558097 ACAGGGTGCGCTTGGCACGCTCGCAAGCAGTGCGAAGACGGCGAAGGGCACGAGCGTTGG 1558038 Query 7395 CGGAAATATC 7404 ||||| ||| Sbjct 1558037 TGGAAAGATC 1558028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132426859480