Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09]
47 sequences; 32,403,370 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq1 161 1e-34
seq3 93.3 5e-14
seq9 89.7 6e-13
>seq1
Length=5810324
Score = 161 bits (178), Expect = 1e-34
Identities = 1125/1783 (63%), Gaps = 57/1783 (3%)
Strand=Plus/Minus
Query 105551 TCAAGACTGAACTGAATTGG-GCGCGCCTTTGCCTTAGATCGGAGATAGTACATCCCGGT 105609
|||| | |||||||||| || ||| || |||| | || || |||||||| || ||
Sbjct 2737842 TCAACAGTGAACTGAATCGGAGCG-GCAGCAGCCTGCGTGCGCAGGTAGTACATGCCAGT 2737784
Query 105610 CTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACT 105669
||||||||| | ||||| | | |||||| | || |||| ||| | ||
Sbjct 2737783 CTTGAGTCCAAGCTTCCATCCTGTGAAATGCATGCTGGTGATCTTGCCCATGCTGGGGTC 2737724
Query 105670 TTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCCAT 105729
| |||| | || | ||| |||||| ||||| |||||| | |||||||||
Sbjct 2737723 CTTCATGTGGATGTTGAGCGACTGAGACTGGTCGATGAAAGCACCACGGTCTGCCGCCAT 2737664
Query 105730 ATCAATGACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATC 105789
| | | | | || ||||| || || ||| || ||||| ||| ||
Sbjct 2737663 CTGCACAATTTGGCGCTGAGAAATCTCCCAAACAGTCTTGTACAGGGCCTTGACATCGTC 2737604
Query 105790 TGGGATATCTGAGATATTTTGAATTGAACC---CCCCGCCTTGACCATGAGATCCTTCAT 105846
||||| | | ||| || || || || || | | || ||| || | | |||||
Sbjct 2737603 AGGGATGTTGGGGATGTTCTGGATGGAGCCGTTCTCGGCAATGA---TGCGGTTTTTCAT 2737547
Query 105847 ATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAG--ATGCTTGTTGACAATC 105904
| | | ||||||||||||| | ||||| || | || ||| |||||||| |
Sbjct 2737546 AGCATCTGACCAAAGACCAAGTTCAACAAGATCCTTCAGCAGCCATGG--GTTGACAACC 2737489
Query 105905 ACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCAT 105964
||||| || || || | | | | ||||| |||| || ||||| ||||||||
Sbjct 2737488 TGGAACTCGCCAGCAAGCACACGGCGCTGGTAGATATTCGAAGTATAGGGCTCAAAGCAC 2737429
Query 105965 TCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTG 106024
|| || || || | || |||| || ||| || ||||| || || | || ||||||
Sbjct 2737428 TCGTTGTTGCCAAGAATCTGTGATGTACTGGCAGTGGGCATGGGGGCAAGCAGCAGACTG 2737369
Query 106025 TTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGA-GCTT 106083
|| |||| || | |||||||| | |||||||| |||||||| | | |||
Sbjct 2737368 TTGCGAATGCCATGCTCCTTGATTTGCTCCTTGAGGCTGTCCCAGTCCCACAGGTCGCTG 2737309
Query 106084 GGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAA 106143
|| || || |||| ||||||| |||| || | |||| ||| | || ||||||| ||
Sbjct 2737308 GGCTTGACGTTCC-ACATATCGTATTGCAGAATACCTTCGGAGGCAGGGGAACCCTTGAA 2737250
Query 106144 TGTCTCATAGGAACCTTGGGCTTCAGCCAATTCA-CAGCTCGCCTCCAGGGATGCGTGAT 106202
| | || | || | | | || | ||| ||| | | | | | ||||| |
Sbjct 2737249 CGACGAGTATGGGCCCTCAACCTTGGCGATCTCAACAGATGCAGTTAAAGCA-GCGTGGT 2737191
Query 106203 ACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGC 106262
| || || |||||||| | || | ||| || ||| || || || | | ||
Sbjct 2737190 AAATAGTCTCAAAGATCTGCTTGTTGAGCTCACGAGCCTCAGGCGACTCGAAAG-GCAGT 2737132
Query 106263 GGCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGC 106321
||| | || || | || ||||| ||||||||||| | ||| || |||| ||| |||
Sbjct 2737131 CGCAGAGCAAGGAAGGCGTCAGCGAGGCCTTGAACACCGACACCGATGGGTCGGTGACGC 2737072
Query 106322 ATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTT 106378
|| || || || || |||| || ||||| ||| || || | |||
Sbjct 2737071 ATGTTGCTGTTACGTGC---CTCAGGGACAGGATAGTGGTTTACATCGATAATCTTGTTG 2737015
Query 106379 AGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAG-TGCGAGT 106437
||||| |||| | || | ||| || || || | | || || ||| |
Sbjct 2737014 AGATTGCGAACCACAACTTGGGTAACTTCGTGCAGCTTCTTGAAGTCGAAGCATGC-ATC 2736956
Query 106438 CTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATC 106497
|| | || | | | | || || | || || | ||||||||||| ||| ||
Sbjct 2736955 ATCGTAGTTAATAAAGGCAGACAGAGCCAGAGAAGCAAGGTTGCAAACAGCAACCTCGTC 2736896
Query 106498 CTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATT 106557
| | | ||||| | || || || || | |||||| || || || || | ||
Sbjct 2736895 AGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGGATTGTACCAAGGTT 2736836
Query 106558 CTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTC 106617
||| ||||| ||||| |||||| || ||||||||||||||| | || | || |||||
Sbjct 2736835 CTTCTGGTTGCTCTTACGGTTGCAAGCGTCCTTGTAGAGCATGAATGGATTACCAGTCTC 2736776
Query 106618 CGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATG--GCGTTGGC 106674
||||||| || || || | | ||| | | || | | || | ||| ||| | ||
Sbjct 2736775 AGTCTGTGCCTCAAGGATCGAGTACCAAAGCTTCTGAGCCTTG----ATGGTGCGCTTGC 2736720
Query 106675 CCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCG 106732
|| | |||||| ||||||||| ||| | || ||||| |||||| ||| || ||||
Sbjct 2736719 CCTTGCCCTCCCTCTCGTACTTCTCGTACAATGCCTCAAATTCCTCA-CCATAGCAGTCG 2736661
Query 106733 GAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGC 106792
| || || || || | ||||| | || | ||| | ||| || || || |||
Sbjct 2736660 GCAAGGCCAGGGCACTCATTAGGACACATGAGTGTCCACTCGCCATTCTTTTCGACACGC 2736601
Query 106793 TTCATGAAAAGGTCTGGAATCC--ACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTT 106850
|||||||| || || ||||||| | || || |||| ||||| | ||| |||| |
Sbjct 2736600 TTCATGAAGAGATCCGGAATCCAAAGAGCGAGGAAA--AGATCACGGGCACGAACCTCCT 2736543
Query 106851 CGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAA 106910
| | || ||||| || | || |||||||| | || || | |||||| || ||||
Sbjct 2736542 CTTTGCCATGGTTCTTACGGAGATCGAGGAACTCAAAGACGTCTGAGTGCCAGGGTTCAA 2736483
Query 106911 GATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTG 106964
| || | |||| | || ||||| ||| |||| | || ||||| || |
Sbjct 2736482 GGTAAATGGCGAAGGCGCC---AGGACGCTTATTGCCACCTTGGTCAACGTAGCGGGCAG 2736426
Query 106965 TGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAA 107024
|| ||| || || || ||||| || | || |||| || || || || || ||
Sbjct 2736425 TGTTGTTGAAGACCCGGAGCATAGGCACAAGGCCATTGGAGGTGCCGTTGGTGCCGGCAA 2736366
Query 107025 TACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTG 107084
| ||| | | || | | || | | | ||||| || |||||| ||| |
Sbjct 2736365 TGTAAGAGCCAGTAGCCCGAATTCGGTGAACATTGAGGCCAATGCCACCAGCCATCTTGG 2736306
Query 107085 AGAT--TTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTT 107142
|||| | ||||| | | | | || || ||||||| || | || ||| || || |
Sbjct 2736305 AGATCATAGCGCA-AGT-CTTGAGCGTGTCATAGATGCCATCAATGCTGTCATCTTTCAT 2736248
Query 107143 GGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGG 107202
| ||| ||| |||||| || | ||| | | || ||||||||||||||||| || ||
Sbjct 2736247 GTCGACAAGAAAGCAAGACGATAGCTGAGCTTGAGGGGTACCAGCATTGAAGAGCGTGGG 2736188
Query 107203 TGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATCA 107260
|| |||||| ||| | | |||| ||||| || ||| ||||| | || |||
Sbjct 2736187 TGAGGCGTGAGTGA--AAAACTTGCTCGACATGAGGTTGTAGGTCTCAATAACGCGCTCA 2736130
Query 107261 ATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303
|| | || || |||||||| || || ||||||| |||||
Sbjct 2736129 ATATTGTCACCCCAGATGCCGACAGCGACGCGCATAATCATGT 2736087
>seq3
Length=3685789
Score = 93.3 bits (102), Expect = 5e-14
Identities = 188/274 (69%), Gaps = 10/274 (4%)
Strand=Plus/Minus
Query 9372 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 9431
||||||||||| || ||||||| || || || || | |||| | ||||||||
Sbjct 1652194 GCATCAATCTCGTCGATGAAGATGATGCACGGGGCGTTCTTGCGGCCTTCGGCAAAGAGA 1652135
Query 9432 TCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG--CGGCGGAAC 9489
||||| || | || |||||||| || ||||||||||| || | | | || ||
Sbjct 1652134 TCGCGCACACGGGAGGGTCCCACACCGACGAACATCTCCACGAACTCAGATCCGCTGACG 1652075
Query 9490 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9549
| || |||||| || |||||||| ||| |||| ||||| || || ||||| |
Sbjct 1652074 CT--GAAGAAGGGAACGCCTGATTCACCGGCAGTGGCCTTTGCGAGCAGTGTTTTACCGG 1652017
Query 9550 TACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCA--CTTC-CAAAGT 9606
| || || || ||||| | ||||| ||||| || || |||||| |||| | || |
Sbjct 1652016 TGCCAGGTGGGCCAGCGAGAATAGCACCACGTGGGATTTTTGCGCCAAGCTTCTCGAACT 1651957
Query 9607 ATCTCTCAGGTTGCTTGAGAAAATCCACAATCTC 9640
||||||| ||||| || || | ||| | |||
Sbjct 1651956 ---TCTCAGGCTGCTTCAGGAAGTTCACGAACTC 1651926
>seq9
Length=1624432
Score = 89.7 bits (98), Expect = 6e-13
Identities = 146/208 (70%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332
|||||| || ||| ||||||||||| || || ||||| || || ||||| || ||
Sbjct 712922 GGCAAAGTCGGTGTGAAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTGAGACC 712863
Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392
|||||||| || |||||||| | ||| | || | ||| | ||| |||||| ||
Sbjct 712862 AGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCGAAAGCACCGCTGAAGAAAAT 712803
Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAA 117451
|||||| ||| || || |||| ||||||| ||||||| ||| |||| |||
Sbjct 712802 ACCCTCAACAGCAGCGAAGGCAACGAGGCGCTGACCGAAGGA-TGAGTTCTTGTCAGCAA 712744
Query 117452 ACCATTTCATTGCCCATTTCGCCTTCTT 117479
||| || | ||||| | ||||||||
Sbjct 712743 TCCACTTGAGAGCCCAGTCGGCCTTCTT 712716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980453386280
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