Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09] 47 sequences; 32,403,370 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1 161 1e-34 seq3 93.3 5e-14 seq9 89.7 6e-13 >seq1 Length=5810324 Score = 161 bits (178), Expect = 1e-34 Identities = 1125/1783 (63%), Gaps = 57/1783 (3%) Strand=Plus/Minus Query 105551 TCAAGACTGAACTGAATTGG-GCGCGCCTTTGCCTTAGATCGGAGATAGTACATCCCGGT 105609 |||| | |||||||||| || ||| || |||| | || || |||||||| || || Sbjct 2737842 TCAACAGTGAACTGAATCGGAGCG-GCAGCAGCCTGCGTGCGCAGGTAGTACATGCCAGT 2737784 Query 105610 CTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACT 105669 ||||||||| | ||||| | | |||||| | || |||| ||| | || Sbjct 2737783 CTTGAGTCCAAGCTTCCATCCTGTGAAATGCATGCTGGTGATCTTGCCCATGCTGGGGTC 2737724 Query 105670 TTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCCAT 105729 | |||| | || | ||| |||||| ||||| |||||| | ||||||||| Sbjct 2737723 CTTCATGTGGATGTTGAGCGACTGAGACTGGTCGATGAAAGCACCACGGTCTGCCGCCAT 2737664 Query 105730 ATCAATGACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATC 105789 | | | | | || ||||| || || ||| || ||||| ||| || Sbjct 2737663 CTGCACAATTTGGCGCTGAGAAATCTCCCAAACAGTCTTGTACAGGGCCTTGACATCGTC 2737604 Query 105790 TGGGATATCTGAGATATTTTGAATTGAACC---CCCCGCCTTGACCATGAGATCCTTCAT 105846 ||||| | | ||| || || || || || | | || ||| || | | ||||| Sbjct 2737603 AGGGATGTTGGGGATGTTCTGGATGGAGCCGTTCTCGGCAATGA---TGCGGTTTTTCAT 2737547 Query 105847 ATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAG--ATGCTTGTTGACAATC 105904 | | | ||||||||||||| | ||||| || | || ||| |||||||| | Sbjct 2737546 AGCATCTGACCAAAGACCAAGTTCAACAAGATCCTTCAGCAGCCATGG--GTTGACAACC 2737489 Query 105905 ACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCAT 105964 ||||| || || || | | | | ||||| |||| || ||||| |||||||| Sbjct 2737488 TGGAACTCGCCAGCAAGCACACGGCGCTGGTAGATATTCGAAGTATAGGGCTCAAAGCAC 2737429 Query 105965 TCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTG 106024 || || || || | || |||| || ||| || ||||| || || | || |||||| Sbjct 2737428 TCGTTGTTGCCAAGAATCTGTGATGTACTGGCAGTGGGCATGGGGGCAAGCAGCAGACTG 2737369 Query 106025 TTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGA-GCTT 106083 || |||| || | |||||||| | |||||||| |||||||| | | ||| Sbjct 2737368 TTGCGAATGCCATGCTCCTTGATTTGCTCCTTGAGGCTGTCCCAGTCCCACAGGTCGCTG 2737309 Query 106084 GGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAA 106143 || || || |||| ||||||| |||| || | |||| ||| | || ||||||| || Sbjct 2737308 GGCTTGACGTTCC-ACATATCGTATTGCAGAATACCTTCGGAGGCAGGGGAACCCTTGAA 2737250 Query 106144 TGTCTCATAGGAACCTTGGGCTTCAGCCAATTCA-CAGCTCGCCTCCAGGGATGCGTGAT 106202 | | || | || | | | || | ||| ||| | | | | | ||||| | Sbjct 2737249 CGACGAGTATGGGCCCTCAACCTTGGCGATCTCAACAGATGCAGTTAAAGCA-GCGTGGT 2737191 Query 106203 ACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGC 106262 | || || |||||||| | || | ||| || ||| || || || | | || Sbjct 2737190 AAATAGTCTCAAAGATCTGCTTGTTGAGCTCACGAGCCTCAGGCGACTCGAAAG-GCAGT 2737132 Query 106263 GGCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGC 106321 ||| | || || | || ||||| ||||||||||| | ||| || |||| ||| ||| Sbjct 2737131 CGCAGAGCAAGGAAGGCGTCAGCGAGGCCTTGAACACCGACACCGATGGGTCGGTGACGC 2737072 Query 106322 ATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTT 106378 || || || || || |||| || ||||| ||| || || | ||| Sbjct 2737071 ATGTTGCTGTTACGTGC---CTCAGGGACAGGATAGTGGTTTACATCGATAATCTTGTTG 2737015 Query 106379 AGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAG-TGCGAGT 106437 ||||| |||| | || | ||| || || || | | || || ||| | Sbjct 2737014 AGATTGCGAACCACAACTTGGGTAACTTCGTGCAGCTTCTTGAAGTCGAAGCATGC-ATC 2736956 Query 106438 CTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATC 106497 || | || | | | | || || | || || | ||||||||||| ||| || Sbjct 2736955 ATCGTAGTTAATAAAGGCAGACAGAGCCAGAGAAGCAAGGTTGCAAACAGCAACCTCGTC 2736896 Query 106498 CTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATT 106557 | | | ||||| | || || || || | |||||| || || || || | || Sbjct 2736895 AGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGGATTGTACCAAGGTT 2736836 Query 106558 CTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTC 106617 ||| ||||| ||||| |||||| || ||||||||||||||| | || | || ||||| Sbjct 2736835 CTTCTGGTTGCTCTTACGGTTGCAAGCGTCCTTGTAGAGCATGAATGGATTACCAGTCTC 2736776 Query 106618 CGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATG--GCGTTGGC 106674 ||||||| || || || | | ||| | | || | | || | ||| ||| | || Sbjct 2736775 AGTCTGTGCCTCAAGGATCGAGTACCAAAGCTTCTGAGCCTTG----ATGGTGCGCTTGC 2736720 Query 106675 CCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCG 106732 || | |||||| ||||||||| ||| | || ||||| |||||| ||| || |||| Sbjct 2736719 CCTTGCCCTCCCTCTCGTACTTCTCGTACAATGCCTCAAATTCCTCA-CCATAGCAGTCG 2736661 Query 106733 GAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGC 106792 | || || || || | ||||| | || | ||| | ||| || || || ||| Sbjct 2736660 GCAAGGCCAGGGCACTCATTAGGACACATGAGTGTCCACTCGCCATTCTTTTCGACACGC 2736601 Query 106793 TTCATGAAAAGGTCTGGAATCC--ACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTT 106850 |||||||| || || ||||||| | || || |||| ||||| | ||| |||| | Sbjct 2736600 TTCATGAAGAGATCCGGAATCCAAAGAGCGAGGAAA--AGATCACGGGCACGAACCTCCT 2736543 Query 106851 CGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAA 106910 | | || ||||| || | || |||||||| | || || | |||||| || |||| Sbjct 2736542 CTTTGCCATGGTTCTTACGGAGATCGAGGAACTCAAAGACGTCTGAGTGCCAGGGTTCAA 2736483 Query 106911 GATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTG 106964 | || | |||| | || ||||| ||| |||| | || ||||| || | Sbjct 2736482 GGTAAATGGCGAAGGCGCC---AGGACGCTTATTGCCACCTTGGTCAACGTAGCGGGCAG 2736426 Query 106965 TGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAA 107024 || ||| || || || ||||| || | || |||| || || || || || || Sbjct 2736425 TGTTGTTGAAGACCCGGAGCATAGGCACAAGGCCATTGGAGGTGCCGTTGGTGCCGGCAA 2736366 Query 107025 TACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTG 107084 | ||| | | || | | || | | | ||||| || |||||| ||| | Sbjct 2736365 TGTAAGAGCCAGTAGCCCGAATTCGGTGAACATTGAGGCCAATGCCACCAGCCATCTTGG 2736306 Query 107085 AGAT--TTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTT 107142 |||| | ||||| | | | | || || ||||||| || | || ||| || || | Sbjct 2736305 AGATCATAGCGCA-AGT-CTTGAGCGTGTCATAGATGCCATCAATGCTGTCATCTTTCAT 2736248 Query 107143 GGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGG 107202 | ||| ||| |||||| || | ||| | | || ||||||||||||||||| || || Sbjct 2736247 GTCGACAAGAAAGCAAGACGATAGCTGAGCTTGAGGGGTACCAGCATTGAAGAGCGTGGG 2736188 Query 107203 TGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATCA 107260 || |||||| ||| | | |||| ||||| || ||| ||||| | || ||| Sbjct 2736187 TGAGGCGTGAGTGA--AAAACTTGCTCGACATGAGGTTGTAGGTCTCAATAACGCGCTCA 2736130 Query 107261 ATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303 || | || || |||||||| || || ||||||| ||||| Sbjct 2736129 ATATTGTCACCCCAGATGCCGACAGCGACGCGCATAATCATGT 2736087 >seq3 Length=3685789 Score = 93.3 bits (102), Expect = 5e-14 Identities = 188/274 (69%), Gaps = 10/274 (4%) Strand=Plus/Minus Query 9372 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 9431 ||||||||||| || ||||||| || || || || | |||| | |||||||| Sbjct 1652194 GCATCAATCTCGTCGATGAAGATGATGCACGGGGCGTTCTTGCGGCCTTCGGCAAAGAGA 1652135 Query 9432 TCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG--CGGCGGAAC 9489 ||||| || | || |||||||| || ||||||||||| || | | | || || Sbjct 1652134 TCGCGCACACGGGAGGGTCCCACACCGACGAACATCTCCACGAACTCAGATCCGCTGACG 1652075 Query 9490 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9549 | || |||||| || |||||||| ||| |||| ||||| || || ||||| | Sbjct 1652074 CT--GAAGAAGGGAACGCCTGATTCACCGGCAGTGGCCTTTGCGAGCAGTGTTTTACCGG 1652017 Query 9550 TACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCA--CTTC-CAAAGT 9606 | || || || ||||| | ||||| ||||| || || |||||| |||| | || | Sbjct 1652016 TGCCAGGTGGGCCAGCGAGAATAGCACCACGTGGGATTTTTGCGCCAAGCTTCTCGAACT 1651957 Query 9607 ATCTCTCAGGTTGCTTGAGAAAATCCACAATCTC 9640 ||||||| ||||| || || | ||| | ||| Sbjct 1651956 ---TCTCAGGCTGCTTCAGGAAGTTCACGAACTC 1651926 >seq9 Length=1624432 Score = 89.7 bits (98), Expect = 6e-13 Identities = 146/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || ||| ||||||||||| || || ||||| || || ||||| || || Sbjct 712922 GGCAAAGTCGGTGTGAAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTGAGACC 712863 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 |||||||| || |||||||| | ||| | || | ||| | ||| |||||| || Sbjct 712862 AGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCGAAAGCACCGCTGAAGAAAAT 712803 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAA 117451 |||||| ||| || || |||| ||||||| ||||||| ||| |||| ||| Sbjct 712802 ACCCTCAACAGCAGCGAAGGCAACGAGGCGCTGACCGAAGGA-TGAGTTCTTGTCAGCAA 712744 Query 117452 ACCATTTCATTGCCCATTTCGCCTTCTT 117479 ||| || | ||||| | |||||||| Sbjct 712743 TCCACTTGAGAGCCCAGTCGGCCTTCTT 712716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980453386280