Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09] 47 sequences; 32,403,370 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq8 89.7 3e-13 >seq8 Length=2135075 Score = 89.7 bits (98), Expect = 3e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || || ||||| ||||||||||| || | || |||| ||| Sbjct 385582 ACCAAGTGGAGAGTACTCTCCTTCTGGATGTTATAGTCGCTCAGAGTGCGACCATCCTCC 385523 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||| || ||||| || || || || || || || | || | ||||||||||| Sbjct 385522 AACTGCTTGCCGGCGAAGATCAGGCGCTGTTGATCCGGGGGAATACCCTCCTTGTCCTGG 385463 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || || | || | || | || ||| || || | ||| ||||| || Sbjct 385462 ATCTTGCTCTTCACATTGTCAATGGTGTCGCTGGACTCGACCTCCAGGGTGATGGTCTTG 385403 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| ||||| |||||||||||||| Sbjct 385402 CCGGTGAGCGTCTTGACAAAGATCTGCAT 385374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633414045816