Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09] 47 sequences; 32,403,370 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1 313 5e-80 seq9 194 3e-44 >seq1 Length=5810324 Score = 313 bits (346), Expect = 5e-80 Identities = 986/1511 (65%), Gaps = 39/1511 (3%) Strand=Plus/Minus Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 |||||||| | |||||| || || | ||||| | | |||||| | || ||||| ||| Sbjct 2737500 GGGTTGACAACCTGGAACTCGCCAGCAAGCACACGGCGCTGGTAGATATTCGAAGTATAG 2737441 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 ||||| | || ||||||||| || |||||||||| || ||||| ||||||||||| || Sbjct 2737440 GGCTCAAAGCACTCGTTGTTGCCAAGAATCTGTGATGTACTGGCAGTGGGCATGGGGGCA 2737381 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCC--GAAGCTCTGCCCAGT 213084 | ||| |||||||| | | || ||||| ||| || || || ||| | |||||| Sbjct 2737380 AGCAGCAGACTGTTGCGAATGCCATGCTCCTTGAT-TTGCTCCTTGAGGCTGT-CCCAGT 2737323 Query 213085 CCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144 ||| ||||||| | ||| ||||||||||| || | |||| || |||| Sbjct 2737322 CCC---------ACAGGTCGCTGGGCTTGACGTTCCACATATCGTATTGCAGAATACCTT 2737272 Query 213145 TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204 | | ||| |||| | | || ||||| ||||| | ||||||| | ||| | Sbjct 2737271 CGGAGGCAGGGGAACCCTTGAACGACGAGTATGGGCCCTCAACCTTGGCGATCTCAACAG 2737212 Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264 | || | ||||||| ||| || || ||||| |||| | ||||||||| |||| Sbjct 2737211 ATGCAGTTAAAGCAGCGTGGTAAATAGTCTCAAAGATCTGCTTGTTGAGCTCACGAGCCT 2737152 Query 213265 CTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324 | || ||| ||| |||| || |||| | ||||| || || || || |||| Sbjct 2737151 CAGGCGACTCGAAAGGCAGTCGCAGAGCAAGGAAGGCGTCAGCGAGGCCTTGAACACCGA 2737092 Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGACTT-GGAGCACTCCTCCAAGGGGTAAAAGTTG 213383 |||||||||| ||| | || ||| || | || ||| | || || ||| Sbjct 2737091 CACCGATGGGTCGGTGACGCATGTTGCTGTTACGTGC-CTCAGGGACAGGATAGTGGTTT 2737033 Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG 213443 ||||| ||||||||||| ||||| | |||| ||| || | | ||| | || | Sbjct 2737032 ACATCGATAATCTTGTTGAGATTGCGAACCACAACTTGGGTAACTTCGTGCAGCTTCTTG 2736973 Query 213444 TGATTGAA-CACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTT 213502 | ||| || | | | ||| | | ||| ||| ||| || | || ||||| Sbjct 2736972 AAGTCGAAGCATGCA-TCATCGTAGTTAATAAAGGCAGACAGAGCCAGAGAAGCAAGGTT 2736914 Query 213503 GCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCA 213562 |||||| || ||||| | || | | ||||| |||||||| ||||| |||||| || Sbjct 2736913 GCAAACAGCAACCTCGTCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCT 2736854 Query 213563 TCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCAT 213622 ||||| || || ||||||| ||||| ||| |||| || |||||||||||||| Sbjct 2736853 GCGGATTGTACCAAGGTTCTTCTGGTTGCTCTTACGGTTGCAAGCGTCCTTGTAGAGCAT 2736794 Query 213623 GTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTT 213682 | | || || ||||| ||| | | | || ||| | ||| || | | ||||| Sbjct 2736793 GAATGGATTACCAGTCTCAGTCTGTGCCTCAAGGATCGAGTACCAAAGCTTCTGAGCCTT 2736734 Query 213683 GACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTC 213742 || ||| || | || | | |||||||| ||||| | | | ||||| Sbjct 2736733 GATGGTGCGCTTGCCCTTGCCCTCCCT---CTCGTACTTCTCGTACAATGCCTCAAATTC 2736677 Query 213743 GTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCC 213802 | || || | | || || || || ||||||||||| |||| || || Sbjct 2736676 CTCACCATAGCAGTCGGCAAGGCCAGGGCACTCATTAGGACACATGAGTGTCCACTCGCC 2736617 Query 213803 GTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCT 213862 | | | ||| | || |||||| || ||||| | ||| || ||| ||| || || | Sbjct 2736616 ATTCTTTTCGACACGCTTCATGAAGAGATCCGGAATCCAAAGAGCGAGGAAAAGATCACG 2736557 Query 213863 GGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGC 213922 || | ||| || ||| ||| || || ||||| || || ||||||| ||| | Sbjct 2736556 GGCACGAACCTCCTCTTTGCCATGGTTCTTACGGAGATCGAGGAACTCAAAGACGTCTGA 2736497 Query 213923 GTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCAC 213979 |||||| || || | ||| ||||| |||||||| | || | ||||| || ||||| || Sbjct 2736496 GTGCCAGGGTTCAAGGTAAATGGCGAAGGCGCCAGGACGCTTATTGCCACCTTGGTCAAC 2736437 Query 213980 CAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTT 214039 | ||| ||||||||| || || | || || || || ||||| ||||| Sbjct 2736436 GTAGCGGGCAGTGTTGTTGAAGACCCGGAGCATAGGCACAAGGCCATTGGAGGTGCCGTT 2736377 Query 214040 GGTTCCCGCTATATACGAGCCGGAGGCCCTCA--GGTTGCTCATGGAGAGCCCTATGCCA 214097 ||| || || || || ||||| | |||| | | || ||| ||| || |||||| Sbjct 2736376 GGTGCCGGCAATGTAAGAGCCAGTAGCCCGAATTCGGTGAACAT--TGAGGCCAATGCCA 2736319 Query 214098 CCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTG 214157 || || |||||||||||| ||||| | | | || || |||||| | |||||| Sbjct 2736318 CCAGCCATCTTGGAGATCATAGCGCAAGTCTTGAGCGTGTCATAGATGCCATCAATGCTG 2736259 Query 214158 TCATCTGTGAGGTTCAGCAAG-AAGCAGCTCGAGAGCTGGGGCCTGGACGAG--CCAGAG 214214 |||||| | | | || |||| ||||| ||| ||||| | || || | | |||| Sbjct 2736258 TCATCTTTCATG-TCGACAAGAAAGCAAGACGATAGCTGAG--CTTGAGGGGTACCAGCA 2736202 Query 214215 TTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCC 214274 ||||| |||||||| ||| || | | ||||||| | || | ||| |||||||||| Sbjct 2736201 TTGAAGAGCGTGGGTGAGGCGTGAGTGAAAAACTTGCTCGACATGAGGTTGTAGGTCTCA 2736142 Query 214275 AGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGG 214334 | || || | || ||| | |||| | ||| | ||||||||| Sbjct 2736141 ATAACGCGCTCAATATTGTCACCCCAGATGCCGACAGCGACGCGCATAATCATGTGCTGT 2736082 Query 214335 GGCCTCT---CTATGGGTCCTTTGGGGCCCTTGAGCAGGTAGGAGCGCTCCAGAGTCTTG 214391 || | || | || || ||| | |||||||||||| || |||||||| |||||| Sbjct 2736081 GGACGCTCAACAATCTTGCCGTTGAG---CTTGAGCAGGTATGATCGCTCCAGGGTCTTG 2736025 Query 214392 AACCCAAAGTA 214402 || |||||||| Sbjct 2736024 AAGCCAAAGTA 2736014 >seq9 Length=1624432 Score = 194 bits (214), Expect = 3e-44 Identities = 352/506 (70%), Gaps = 13/506 (3%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| | || | ||||| |||||||| ||||| || ||| ||||||||||| Sbjct 713213 CTGGTAGTCAGCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTC 713154 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCC-AGCA 47957 ||||||| ||| ||||||| | ||| |||||| | || ||| | | || | Sbjct 713153 CATGAAGTCGAAAGGGTTGGTGGAGTTGTACACCT-TCTCGTTGCCAAGAGCGACGAGGA 713095 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 || | || |||||| |||| ||||| | |||||||||| ||||||||| | ||||| Sbjct 713094 GGCGGTCAGCGACGAACTCAATGTACTGCTGCATGAGGGTGGCGTTCATGCCGAGGAGGG 713035 Query 48018 ACACGGGCAA-AGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 ||| || || ||| | ||||| |||||||| || |||||| || | ||| Sbjct 713034 -CACAGGGAAGAGCATCAGTGAGGAACTCCTTTTCGTAAACCACGGCCTCAGTGATAATA 712976 Query 48077 TGCTTAACGCGGGACT--CTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 | || || | || ||| || | || || |||||| || | || | ||| Sbjct 712975 TCCTCAATGACCTGCTTGCTGGGGCGGTTCTT---CAGGTG---GGAGTGAAGGAGACAG 712922 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 |||||||| |||| | || || || || ||| ||| |||||||||| ||||||| Sbjct 712921 GCAAAGTCGGTGTGAAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTGAGACCA 712862 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||||| || | || ||||||||||| || | ||||||| || |||||| || Sbjct 712861 GGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCGAAAGCACCGCTGAAGAAAATA 712802 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 ||||| || || ||||| || ||| | || ||||| || | ||||||||| | ||| Sbjct 712801 CCCTCAACAGCAGCGAAGGCAACGAGGCGCTGACCGAAGGATGAGTTCTTGTCAGCAATC 712742 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTT 48339 || || |||||||| |||||||| Sbjct 712741 CACTTGAGAGCCCAGTCGGCCTTCTT 712716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532252724480