Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09]
47 sequences; 32,403,370 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq1 235 1e-56
seq9 113 8e-20
>seq1
Length=5810324
Score = 235 bits (260), Expect = 1e-56
Identities = 823/1267 (65%), Gaps = 37/1267 (3%)
Strand=Plus/Minus
Query 221423 GCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGGAGAAGT 221481
||||||||||| || |||||||||||| ||||||||| ||| | ||||| || ||
Sbjct 2737200 GCAGCGTGGTAAATAGTCTCAAAGATCTGCTTGTTGAG-CTCACGAGCCTCAGGCGACTC 2737142
Query 221482 GAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGG 221541
||| |||| ||||| | ||| |||| || || || || || |||| |||||||||
Sbjct 2737141 GAAAGGCAGTCGCAGAGCAAGGAAGGCGTCAGCGAGGCCTTGAACACCGACACCGATGGG 2737082
Query 221542 CCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATC 221599
| ||| | | ||||| | || || || || || ||||| ||| || |||||
Sbjct 2737081 TCGGTGACGCATGTTGCTGTTACGT--GCCTCAGGGACAGGATAGTGGTTTACATCGATA 2737024
Query 221600 AGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAAC 221659
| |||||||| || || | |||| || ||| |||||||| ||||
Sbjct 2737023 ATCTTGTTGAGATTGCGAACCACAACTTGGGTAACTTCGTGCAGCTTCT------TGAAG 2736970
Query 221660 ACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGG 221719
| || | | |||| | | | ||| || || || | || |||
Sbjct 2736969 TCGAAGCATGCATCATCGTAG------TTAATAAAGGCAGACAGAGCCAGAGAAGCAAGG 2736916
Query 221720 TTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTG 221779
|| || || || |||||||| | ||||| |||||||| || || |||||| |
Sbjct 2736915 TTGCAAACAGCAACCTCGTCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAG 2736856
Query 221780 CACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGC 221839
| ||| || || |||| || || || ||| || ||| ||||||||||||||||
Sbjct 2736855 CTGCGGATTGTACCAAGGTTCTTCTGGTTGCTCTTACGGTTGCAAGCGTCCTTGTAGAGC 2736796
Query 221840 ATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG-GC 221898
|| || ||| |||||||| ||| ||| | || ||| || ||| || | |||| ||
Sbjct 2736795 ATGAATGGATTACCAGTCTCAGTCTGTGCCTCAAGGATCGAGTACCAAAGCT-TCTGAGC 2736737
Query 221899 GCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAA 221958
| | || | |||| | ||||| ||| | | | || || | || | ||||
Sbjct 2736736 CTTGATGGTGCGCTTGCCCTTGCCCTCCCTCTCGTACTTCTCG-TACAATGCCT--CAAA 2736680
Query 221959 CTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTG 222018
| ||||| || ||| | ||||| || ||| |||||||| || |||| |
Sbjct 2736679 TTCCTCACCATAGCAGTCGGCAAGGCCAGGGCACTCATTAGGACACATGAGTGTCCACTC 2736620
Query 222019 CTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATC 222078
|| | || ||| | || ||||||||| ||||| ||||| || || | || |||||
Sbjct 2736619 GCCATTCTTTTCGACACGCTTCATGAAGAGATCCGGAATCCAAAGAGCGAGGAAAAGATC 2736560
Query 222079 TCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTC 222138
| || || |||||| ||| | ||| || | ||||| | |||||||| | |||
Sbjct 2736559 ACGGGCACGAACCTCCTCTTTGCCATGGTTCTTACGGAGATCGAGGAACTCAAAGACGTC 2736500
Query 222139 AGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATC 222198
| |||||| || || || || | ||| | ||||| || ||||| |||||||| || ||
Sbjct 2736499 TGAGTGCCAGGGTTCAAGGTAAATGGCGAAGGCGCCAGGACGCTTATTGCCACCTTGGTC 2736440
Query 222199 CACCATCCTCTCCAGAGC-GTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGAC 222257
|| | | || | |||||||| || || | || || || || ||||| |
Sbjct 2736439 AACGTAGCGGGC-AGTGTTGTTGAAGACCCGGAGCATAGGCACAAGGCCATTGGAGGTGC 2736381
Query 222258 CGTTGGTGCCCTTAATGTACGCACCGCCGGCCC---TCAGGTTACTGGCAGACATGCCGA 222314
|||||||||| |||||| | || |||| | ||| | || | ||| |
Sbjct 2736380 CGTTGGTGCCGGCAATGTAAGAGCCAGTAGCCCGAATTCGGTGA---ACATTGAGGCCAA 2736324
Query 222315 TACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCA 222374
| ||||| || || |||||||| ||||| ||||||| ||||| |||||| || |
Sbjct 2736323 TGCCACCAGCCATCTTGGAGATCATAGCGCAAGTCTTGAGCGTGTCATAGATGCCATCAA 2736264
Query 222375 TAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGG 222434
| ||| || || | || | ||||| |||||||| | ||||| || | || || |
Sbjct 2736263 TGCTGTCATCTTTCATGTCGACAAGAAAGCAAGACGATAGCTGAGCTTGAGGGGTACCAG 2736204
Query 222435 CGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCT 222494
| || || |||||||| |||||| || || | || ||||| || | ||| ||||
Sbjct 2736203 CATTGAAGAGCGTGGGTGAGGCGTGAGTGAAAAACTTGCTCGACATGAGGTTGTAGGTCT 2736144
Query 222495 CTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGGCGCATCTCATGTACATGTAC 222553
| | || | | || ||||| ||| || | | | ||| | ||| ||||| |
Sbjct 2736143 CAATAACGCGCTCAATATTGTCACCCCAGATGCCG-ACAGCGACGCGCATAATCATGTGC 2736085
Query 222554 TGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCT 222611
|| || | ||| ||| || | ||||| ||||||||| ||| ||||| ||||
Sbjct 2736084 TGTGGACGCTCAACAATCTTGCCGTTGAGCT--TGAGCAGGTATGATCGCTCCAGGGTCT 2736027
Query 222612 TGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGCTCCG 222671
|||| |||||||| | | || || || | | ||| || | |||| ||||||||||
Sbjct 2736026 TGAAGCCAAAGTATTGGTAGTTGAAATCACGGTCGTACACGATCGCGGAGTCCAGCTCCT 2735967
Query 222672 ACTTGTG 222678
||||||
Sbjct 2735966 CCTTGTG 2735960
Score = 95.1 bits (104), Expect = 2e-14
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175
||| || || ||||| || || | ||||| | | |||||| | || ||||| | ||
Sbjct 2737498 GTTGACAACCTGGAACTCGCCAGCAAGCACACGGCGCTGGTAGATATTCGAAGTATAGGG 2737439
Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235
|| | || |||||||||||| || ||||| | || ||||| ||||||||||| || |
Sbjct 2737438 CTCAAAGCACTCGTTGTTGCCAAGAATCTGTGATGTACTGGCAGTGGGCATGGGGGCAAG 2737379
Query 221236 CAGCAGACTGTTGCG 221250
|||||||||||||||
Sbjct 2737378 CAGCAGACTGTTGCG 2737364
>seq9
Length=1624432
Score = 113 bits (124), Expect = 8e-20
Identities = 293/450 (65%), Gaps = 13/450 (3%)
Strand=Plus/Plus
Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936
|||| || || ||||| |||||||| ||||| || || ||||||||| | || || |||
Sbjct 712771 AGCGCCTCGTTGCCTTCGCTGCTGTTGAGGGTATTTTCTTCAGCGGTGCTTTCGCTTCCA 712830
Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATC 25995
|||||||||||||| || || |||||| || || ||||| ||||||||||| |||
Sbjct 712831 TCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCT-CACTTTCTCCAACGAGCTTATC 712889
Query 25996 AGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTC 26055
| || |||||||| |||| || |||||||| || || || | |||| ||
Sbjct 712890 TCTCGTGATGAGGGTCTTCACACCGACTTTGCCTGTCTCCTTCACTC---CCACCTG--- 712943
Query 26056 CACAAACCTTC---TCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGA 26111
| |||| | |||| || | | | ||| |||| ||||| |||| |||
Sbjct 712944 -AAGAACCGCCCCAGCAAGCAGGTCATTGAGGATATTATCACTGAGGCCGTGGTTTACGA 713002
Query 26112 GAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCAT 26171
|||||||| | | ||||||||| || |||||
Sbjct 713003 AAAGGAGTTCCTCACTGATGCTCTTCCCTGTGCCCTCCTCGGCATGAACGCCACCCTCAT 713062
Query 26172 GAGCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACT 26231
| || |||||||||| || || |||| || || | || || || | |
Sbjct 713063 GCAGCAGTACATTGAGTTCGTCGCTGACCGCCTCCTCGTCGCTCTTGGCAACGAGAAGGT 713122
Query 26232 CTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAA 26291
|||| | | ||||| |||||||| ||||| ||||| || ||| || ||||||||
Sbjct 713123 GTACAACTCCACCAACCCTTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAA 713182
Query 26292 CTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321
|||||| || ||| | |||| ||||| ||
Sbjct 713183 CTTCTTCGAGAAGCGTGTCGCTGACTACCA 713212
Score = 96.9 bits (106), Expect = 6e-15
Identities = 165/235 (70%), Gaps = 7/235 (3%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| | |||||||||||||| | ||| |||||| ||||| || || |||||
Sbjct 712316 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAAATCGATCTC 712375
Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592
||||||| | ||| |||| || || || | | |||||| || | || ||
Sbjct 712376 TCCAAGGATCTTCACGACTGGAACAACCGC-CTGAACGATGACGAGAAGTACTTCATCTC 712434
Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652
|| | ||||| ||||| || |||||||| || || || |||||||| ||| ||| |
Sbjct 712435 TCACATCTTGGCTTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTGGTTGAGCG 712494
Query 25653 ATTCACCAGGGAAGTGCA-GTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706
|||| | |||||||| || | || |||| || |||||||||||||||||
Sbjct 712495 CTTCAGCGCCGAAGTGCAAGTCCCTG-AGGCTCGCTGCTTCTACGGTTTCCAGAT 712548
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844254303680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |