Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09] 47 sequences; 32,403,370 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1 235 1e-56 seq9 113 8e-20 >seq1 Length=5810324 Score = 235 bits (260), Expect = 1e-56 Identities = 823/1267 (65%), Gaps = 37/1267 (3%) Strand=Plus/Minus Query 221423 GCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGGAGAAGT 221481 ||||||||||| || |||||||||||| ||||||||| ||| | ||||| || || Sbjct 2737200 GCAGCGTGGTAAATAGTCTCAAAGATCTGCTTGTTGAG-CTCACGAGCCTCAGGCGACTC 2737142 Query 221482 GAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGG 221541 ||| |||| ||||| | ||| |||| || || || || || |||| ||||||||| Sbjct 2737141 GAAAGGCAGTCGCAGAGCAAGGAAGGCGTCAGCGAGGCCTTGAACACCGACACCGATGGG 2737082 Query 221542 CCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATC 221599 | ||| | | ||||| | || || || || || ||||| ||| || ||||| Sbjct 2737081 TCGGTGACGCATGTTGCTGTTACGT--GCCTCAGGGACAGGATAGTGGTTTACATCGATA 2737024 Query 221600 AGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAAC 221659 | |||||||| || || | |||| || ||| |||||||| |||| Sbjct 2737023 ATCTTGTTGAGATTGCGAACCACAACTTGGGTAACTTCGTGCAGCTTCT------TGAAG 2736970 Query 221660 ACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGG 221719 | || | | |||| | | | ||| || || || | || ||| Sbjct 2736969 TCGAAGCATGCATCATCGTAG------TTAATAAAGGCAGACAGAGCCAGAGAAGCAAGG 2736916 Query 221720 TTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTG 221779 || || || || |||||||| | ||||| |||||||| || || |||||| | Sbjct 2736915 TTGCAAACAGCAACCTCGTCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAG 2736856 Query 221780 CACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGC 221839 | ||| || || |||| || || || ||| || ||| |||||||||||||||| Sbjct 2736855 CTGCGGATTGTACCAAGGTTCTTCTGGTTGCTCTTACGGTTGCAAGCGTCCTTGTAGAGC 2736796 Query 221840 ATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG-GC 221898 || || ||| |||||||| ||| ||| | || ||| || ||| || | |||| || Sbjct 2736795 ATGAATGGATTACCAGTCTCAGTCTGTGCCTCAAGGATCGAGTACCAAAGCT-TCTGAGC 2736737 Query 221899 GCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAA 221958 | | || | |||| | ||||| ||| | | | || || | || | |||| Sbjct 2736736 CTTGATGGTGCGCTTGCCCTTGCCCTCCCTCTCGTACTTCTCG-TACAATGCCT--CAAA 2736680 Query 221959 CTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTG 222018 | ||||| || ||| | ||||| || ||| |||||||| || |||| | Sbjct 2736679 TTCCTCACCATAGCAGTCGGCAAGGCCAGGGCACTCATTAGGACACATGAGTGTCCACTC 2736620 Query 222019 CTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATC 222078 || | || ||| | || ||||||||| ||||| ||||| || || | || ||||| Sbjct 2736619 GCCATTCTTTTCGACACGCTTCATGAAGAGATCCGGAATCCAAAGAGCGAGGAAAAGATC 2736560 Query 222079 TCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTC 222138 | || || |||||| ||| | ||| || | ||||| | |||||||| | ||| Sbjct 2736559 ACGGGCACGAACCTCCTCTTTGCCATGGTTCTTACGGAGATCGAGGAACTCAAAGACGTC 2736500 Query 222139 AGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATC 222198 | |||||| || || || || | ||| | ||||| || ||||| |||||||| || || Sbjct 2736499 TGAGTGCCAGGGTTCAAGGTAAATGGCGAAGGCGCCAGGACGCTTATTGCCACCTTGGTC 2736440 Query 222199 CACCATCCTCTCCAGAGC-GTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGAC 222257 || | | || | |||||||| || || | || || || || ||||| | Sbjct 2736439 AACGTAGCGGGC-AGTGTTGTTGAAGACCCGGAGCATAGGCACAAGGCCATTGGAGGTGC 2736381 Query 222258 CGTTGGTGCCCTTAATGTACGCACCGCCGGCCC---TCAGGTTACTGGCAGACATGCCGA 222314 |||||||||| |||||| | || |||| | ||| | || | ||| | Sbjct 2736380 CGTTGGTGCCGGCAATGTAAGAGCCAGTAGCCCGAATTCGGTGA---ACATTGAGGCCAA 2736324 Query 222315 TACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCA 222374 | ||||| || || |||||||| ||||| ||||||| ||||| |||||| || | Sbjct 2736323 TGCCACCAGCCATCTTGGAGATCATAGCGCAAGTCTTGAGCGTGTCATAGATGCCATCAA 2736264 Query 222375 TAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGG 222434 | ||| || || | || | ||||| |||||||| | ||||| || | || || | Sbjct 2736263 TGCTGTCATCTTTCATGTCGACAAGAAAGCAAGACGATAGCTGAGCTTGAGGGGTACCAG 2736204 Query 222435 CGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCT 222494 | || || |||||||| |||||| || || | || ||||| || | ||| |||| Sbjct 2736203 CATTGAAGAGCGTGGGTGAGGCGTGAGTGAAAAACTTGCTCGACATGAGGTTGTAGGTCT 2736144 Query 222495 CTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGGCGCATCTCATGTACATGTAC 222553 | | || | | || ||||| ||| || | | | ||| | ||| ||||| | Sbjct 2736143 CAATAACGCGCTCAATATTGTCACCCCAGATGCCG-ACAGCGACGCGCATAATCATGTGC 2736085 Query 222554 TGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCT 222611 || || | ||| ||| || | ||||| ||||||||| ||| ||||| |||| Sbjct 2736084 TGTGGACGCTCAACAATCTTGCCGTTGAGCT--TGAGCAGGTATGATCGCTCCAGGGTCT 2736027 Query 222612 TGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGCTCCG 222671 |||| |||||||| | | || || || | | ||| || | |||| |||||||||| Sbjct 2736026 TGAAGCCAAAGTATTGGTAGTTGAAATCACGGTCGTACACGATCGCGGAGTCCAGCTCCT 2735967 Query 222672 ACTTGTG 222678 |||||| Sbjct 2735966 CCTTGTG 2735960 Score = 95.1 bits (104), Expect = 2e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||| || || ||||| || || | ||||| | | |||||| | || ||||| | || Sbjct 2737498 GTTGACAACCTGGAACTCGCCAGCAAGCACACGGCGCTGGTAGATATTCGAAGTATAGGG 2737439 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 || | || |||||||||||| || ||||| | || ||||| ||||||||||| || | Sbjct 2737438 CTCAAAGCACTCGTTGTTGCCAAGAATCTGTGATGTACTGGCAGTGGGCATGGGGGCAAG 2737379 Query 221236 CAGCAGACTGTTGCG 221250 ||||||||||||||| Sbjct 2737378 CAGCAGACTGTTGCG 2737364 >seq9 Length=1624432 Score = 113 bits (124), Expect = 8e-20 Identities = 293/450 (65%), Gaps = 13/450 (3%) Strand=Plus/Plus Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936 |||| || || ||||| |||||||| ||||| || || ||||||||| | || || ||| Sbjct 712771 AGCGCCTCGTTGCCTTCGCTGCTGTTGAGGGTATTTTCTTCAGCGGTGCTTTCGCTTCCA 712830 Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATC 25995 |||||||||||||| || || |||||| || || ||||| ||||||||||| ||| Sbjct 712831 TCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCT-CACTTTCTCCAACGAGCTTATC 712889 Query 25996 AGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTC 26055 | || |||||||| |||| || |||||||| || || || | |||| || Sbjct 712890 TCTCGTGATGAGGGTCTTCACACCGACTTTGCCTGTCTCCTTCACTC---CCACCTG--- 712943 Query 26056 CACAAACCTTC---TCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGA 26111 | |||| | |||| || | | | ||| |||| ||||| |||| ||| Sbjct 712944 -AAGAACCGCCCCAGCAAGCAGGTCATTGAGGATATTATCACTGAGGCCGTGGTTTACGA 713002 Query 26112 GAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCAT 26171 |||||||| | | ||||||||| || ||||| Sbjct 713003 AAAGGAGTTCCTCACTGATGCTCTTCCCTGTGCCCTCCTCGGCATGAACGCCACCCTCAT 713062 Query 26172 GAGCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACT 26231 | || |||||||||| || || |||| || || | || || || | | Sbjct 713063 GCAGCAGTACATTGAGTTCGTCGCTGACCGCCTCCTCGTCGCTCTTGGCAACGAGAAGGT 713122 Query 26232 CTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAA 26291 |||| | | ||||| |||||||| ||||| ||||| || ||| || |||||||| Sbjct 713123 GTACAACTCCACCAACCCTTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAA 713182 Query 26292 CTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321 |||||| || ||| | |||| ||||| || Sbjct 713183 CTTCTTCGAGAAGCGTGTCGCTGACTACCA 713212 Score = 96.9 bits (106), Expect = 6e-15 Identities = 165/235 (70%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | ||| |||||| ||||| || || ||||| Sbjct 712316 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAAATCGATCTC 712375 Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 ||||||| | ||| |||| || || || | | |||||| || | || || Sbjct 712376 TCCAAGGATCTTCACGACTGGAACAACCGC-CTGAACGATGACGAGAAGTACTTCATCTC 712434 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 || | ||||| ||||| || |||||||| || || || |||||||| ||| ||| | Sbjct 712435 TCACATCTTGGCTTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTGGTTGAGCG 712494 Query 25653 ATTCACCAGGGAAGTGCA-GTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 |||| | |||||||| || | || |||| || ||||||||||||||||| Sbjct 712495 CTTCAGCGCCGAAGTGCAAGTCCCTG-AGGCTCGCTGCTTCTACGGTTTCCAGAT 712548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844254303680