Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09]
47 sequences; 32,403,370 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq8 100 2e-15
>seq8
Length=2135075
Score = 100 bits (110), Expect = 2e-15
Identities = 158/221 (71%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCT-AGAG 480609
|||||||||||| || | || || ||||| || || | || || || ||| ||||
Sbjct 385367 ACGAAGACGGAGCACCAAGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTC-GCTCAGAG 385309
Query 480610 TTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTC 480669
| | | ||| ||||| ||||| ||||| ||||| || || |||||||| || ||||| |
Sbjct 385308 TGCGGCCATCCTCAAGCTGCTTACCAGCGAAAATCAGGCGCTGTTGATCCGGGGGAATAC 385249
Query 480670 CTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCA 480728
| ||||| || |||||||| || || || || || |||| || | || ||
Sbjct 385248 CCTCCTTATCCTGAATCTTGCTCTTCACGTTGTCGATGGTGTCAGATGACTCAA-CCTCG 385190
Query 480729 AGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || || || ||||| |||||||| ||||| |||||
Sbjct 385189 AGAGTGATTGTCTTGCCGGTCAGAGTCTTGACGAAGATTTG 385149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268177183941956
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |