Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09] 47 sequences; 32,403,370 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1 165 1e-35 seq9 89.7 6e-13 >seq1 Length=5810324 Score = 165 bits (182), Expect = 1e-35 Identities = 555/848 (65%), Gaps = 27/848 (3%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| ||||| | ||||| ||||| |||||||| || || | ||||| || Sbjct 2736080 CCACAGCACATGATTATGCGCGTCGCTGTCGGCATCTGGGGTGACAATATTGAGCGCGTT 2736139 Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329 | ||||| ||| || ||||| |||| | | ||| |||||| |||| || |||| Sbjct 2736140 ATTGAGACCTACAACCTCATGTCGAGCAAGTTTT--TCACTCACGCCTCACCCACGCTCT 2736197 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 ||||||||||||| || | | ||| | || |||||| ||| ||| || || || | Sbjct 2736198 TCAATGCTGGTACCCCTCAAGCTCAGCTATCGTCTTGCTTTCTTGTCGACATGAAAGATG 2736257 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCAAAGTGGGC 75447 || || | || ||||||| || || | | | | ||||| | ||||| ||| ||| Sbjct 2736258 ACAGCATTGATGGCATCTATGACACGCTCAAG-ACT-TGCGCTATGATCTCCAAGATGGC 2736315 Query 75448 TGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGAC 75507 ||| || ||||| | | | || | | || | | ||| ||| || || Sbjct 2736316 TGGTGGCATTGGCCTCAATGTTCACCGAATTCGGGCTACTGGCTCTTACATTGCCGGCAC 2736375 Query 75508 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 75567 || || || |||| || | || ||||| || || || ||| ||| || ||||| Sbjct 2736376 CAACGGCACCTCCAATGGCCTTGTGCCTATGCTCCGGGTCTTCAACAACACTGCCCGCTA 2736435 Query 75568 TGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATG 75621 || | |||| || ||||| || || |||| | ||| | ||||| || Sbjct 2736436 CGTTGACCAAGGTGGCAATAAGCGTCCT---GGCGCCTTCGCCATTTACCTTGAACCCTG 2736492 Query 75622 GCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCG 75681 ||| | || || | |||||||| || | || ||||| || | || |||| ||| Sbjct 2736493 GCACTCAGACGTCTTTGAGTTCCTCGATCTCCGTAAGAACCATGGCAAAGAGGAGGTTCG 2736552 Query 75682 GTGTAGAGATCTCTTTTCATCCCTGT--GGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739 | ||||| |||| || || | ||||||| || || ||||||||||| || || Sbjct 2736553 TGCCCGTGATCT--TTTCCTCGCTCTTTGGATTCCGGATCTCTTCATGAAGCGTGTCGAA 2736610 Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC-GCGGT 75798 || ||| | ||| | || | ||||| | || || || || ||||| || | Sbjct 2736611 AAGAATGGCGAGTGGACACTCATGTGTCCTAATGAGTGCCCTGGCCTTGCCGACTGCTAT 2736670 Query 75799 GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCG-A 75857 || |||||| ||||| || | ||| ||||| || |||||| | | ||| ||| | Sbjct 2736671 GG-TGAGGAATTTGAGGCATTGTACGAGAAGTACGAGAGGGAGGGCAAGGGCAA-GCGCA 2736728 Query 75858 CTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACA 75916 | | | || | | || | ||||| | | || || | ||||||| |||||||| | Sbjct 2736729 CCAT-CAAGGCTCAGAAGCTTTGGTACTCGATCCTTGAGGCACAGACTGAGACTGGTAAT 2736787 Query 75917 CCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACA 75976 |||| ||||| |||||||| ||||| ||| ||||| ||||| ||||| | || ||| Sbjct 2736788 CCATTCATGCTCTACAAGGACGCTTGCAACCGTAAGAGCAACCAGAAGAACCTTGGTACA 2736847 Query 75977 ATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCT 76036 ||| ||||| || |||||||| || || | ||||| | | | || ||| ||| Sbjct 2736848 ATCCGCAGCTCCAACCTTTGCACTGAGATCATCGAGTATTCTGCTCCTGACGAGGTTGCT 2736907 Query 76037 GTTTGCAA 76044 |||||||| Sbjct 2736908 GTTTGCAA 2736915 >seq9 Length=1624432 Score = 89.7 bits (98), Expect = 6e-13 Identities = 146/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGCTCCTTCGCCGAGCG 65081 |||||||| | ||||| | || ||| ||| |||| ||| ||||||| |||| Sbjct 712716 AAGAAGGCCGACTGGGCTCTCAAGTGGATTGCTGACAAGAACTCA-TCCTTCGGTCAGCG 712774 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTA 65141 ||| |||| || || ||| |||||||| |||||| ||| | ||| | || | Sbjct 712775 CCTCGTTGCCTTCGCTGCTGTTGAGGGTATTTTCTTCAGCGGTGCTTTCGCTTCCATCTT 712834 Query 65142 TTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCG 65201 ||| | |||||||| || |||||||| || || ||||| || || ||||| || || Sbjct 712835 CTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTCACTTTCTCCAACGAGCTTATCTCTCG 712894 Query 65202 AGATGAGGGTCTCCACCAGGAGTTTGCC 65229 ||||||||||| ||| || |||||| Sbjct 712895 TGATGAGGGTCTTCACACCGACTTTGCC 712922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569249515360