Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09] 47 sequences; 32,403,370 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1 149 6e-31 seq8 109 5e-19 seq6 91.5 1e-13 >seq1 Length=5810324 Score = 149 bits (164), Expect = 6e-31 Identities = 1068/1684 (63%), Gaps = 76/1684 (5%) Strand=Plus/Minus Query 138358 ATCTCCCACACGGTCTTGTATAGATCACGAATAT-GTCGCGGTATTGTTGCAATATTTTG 138416 |||||||| || |||||||| || | | || ||| || || | | || || || Sbjct 2737641 ATCTCCCAAACAGTCTTGTACAGGGCCTTGACATCGTCAGGG-ATGTTGGGGATGTTCTG 2737583 Query 138417 AATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACTT 138476 ||| ||||| | ||||||||||| ||| |||| |||| | ||| ||| || Sbjct 2737582 GATGGAGCCGTTCTCGGCAATGATGCGGTTTTTCATAGCATCTGACCAAAGAC-CAAGTT 2737524 Query 138477 GATCAAG-TCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGAC 138535 | |||| || || | ||| || ||| | ||||| || || || || | || || | Sbjct 2737523 CAACAAGATCCTTCAGCAGCCATGGGTTGACAACCTGGAACTCGCCAGCAAGCACACGGC 2737464 Query 138536 GAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCG 138595 | ||| || || || | |||||||| | |||||||| || |||||||| | | Sbjct 2737463 GCTGGTAGATATTCGAAGTATAGGGCTCAAAGCACTCGTTGTTGCCAAGAATCTGTGATG 2737404 Query 138596 TGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTC 138655 | | || || |||||| || | || ||| || || | || || ||||||| Sbjct 2737403 TACTGGCAGTGGGCATGGGGGCAAGCAGCAGACTGTTGCGAATGCCATGCTCCTTGATTT 2737344 Query 138656 GTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACT 138715 | |||||||| ||||||||||| ||||| || || ||||||||||||||| | Sbjct 2737343 GCTCCTTGAGGCTGTCCCAGTCCCACAGGTCGCTGGGCTTGACGTTCCACATATCGTATT 2737284 Query 138716 GTA----ACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATACACCA--AACT 138769 | | || ||| | | | || || |||| | |||| |||| || ||| Sbjct 2737283 GCAGAATACCTTCGGAGGCAGG-GGAAC--CCTT-GAACGACGAGTATGGGCCCTCAAC- 2737229 Query 138770 CTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCT 138829 |||| || | ||| || | ||| | | ||||||||| || ||||||| Sbjct 2737228 CTTG-GCGATCTCAACAGATGCAGTTAAAGCAGCGTGGTAAATAGTCTCAAAGATCTGCT 2737170 Query 138830 GATTGAGCAATCGGGCCTC-GGCGCTCTCGTACGGCATGCG--GAGCATCGTGAACGCGT 138886 |||||| || ||||| |||| |||| | |||| || ||||| | || |||| Sbjct 2737169 TGTTGAGCTCACGAGCCTCAGGCGA-CTCGAAAGGCAGTCGCAGAGCAAGG--AAGGCGT 2737113 Query 138887 CGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCG- 138945 | || || ||||| || || || |||| || || || |||| || ||| || || Sbjct 2737112 CAGCGAGGCCTTGAACACCGACACCGATGGGTCGGTGACGCATGTT----GCTGTTACGT 2737057 Query 138946 GCTTC---GATAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACC 139002 || || || |||||| | |||||||||||| || ||||| | ||| || || || || Sbjct 2737056 GCCTCAGGGACAGGATAGTGGTTTACATCGATAATCTTGTTGAGATTGCGAACCACAAC- 2736998 Query 139003 TTAGTCGTATGCTTTAATCGTTCAAAATCGT-ATGTGCCCCCGTTGTCGTCGACGACGTC 139061 || | ||| ||| ||| || || | | || | | | || || || Sbjct 2736997 TTGG--GTAA-CTT----CGTGCAGCTTCTTGAAGTCGAAGCATG--CATCATCGTAGTT 2736947 Query 139062 GACAAATTTGTTGACACAAATCGAG--GCTATGTTGCACACCGCCACTTCGTCGGGGTCG 139119 | ||| | |||| | ||| || | |||||| || || || ||||| || | Sbjct 2736946 AATAAAG--GCAGACAGAGCCAGAGAAGCAAGGTTGCAAACAGCAACCTCGTCAGGAGCA 2736889 Query 139120 CTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGA 139179 || |||| || || | || | || | ||| ||||| | || | || Sbjct 2736888 GAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGGATTGTACCAAGGTTCTTCTGG 2736829 Query 139180 TTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGT 139239 ||||| || ||||| ||||| || ||||| ||||| | || | ||||| || ||| Sbjct 2736828 TTGCTCTTACGGTTGCAAGCGTCCTTGTAGAGCATGAATGGATTACCAGTCTCAGTCTGT 2736769 Query 139240 GTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGTATTTGACGCACGTAAAGTT--CGT 139297 | ||| | || | | | | | | ||| | || | || | | || | | Sbjct 2736768 GCCTCAAGGATCGAGTACCAAAGCTTCTGAGCCTTGAT--GGTGCGCTTGCCCTTGCCCT 2736711 Query 139298 CGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGC 139357 | | ||||||||| ||||| | | | || ||| ||||| ||| ||| | ||| | Sbjct 2736710 CCCTCTCGTACTTCTCGTACAATGCCTCAAATTCCTCACCATAGCAGTCGGCAAGGCCAG 2736651 Query 139358 GACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACA 139417 | |||| | |||||||||||| | ||| |||| ||| | ||| ||| ||||||| | Sbjct 2736650 GGCACTCATTAGGACACATGAGTGTCCACTCGCCATTCTTTTCGACACGCTTCATGAAGA 2736591 Query 139418 GATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTC-CGAACCCATG 139476 ||||||||||||| | ||||| | | ||| || || | | || | | ||||| Sbjct 2736590 GATCCGGAATCCAAAGAGCGAGGAAAAGATCACGGGCA--CGAACCTCCTCTTTGCCATG 2736533 Query 139477 TTACGTTTC--ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGG 139534 | | || | | | ||||| ||||| ||||| | |||||| ||||| || || |||| Sbjct 2736532 GTTC-TTACGGAGATCGAGGAACTCAAAGACGTCTGAGTGCCAGGGTTCAAGGTAAATGG 2736474 Query 139535 CCATTGCGCCTTTCCGTTT---GCCACCTTGATCGACGTGTCGTACAGCATTATTGAATA 139591 | | ||||| || || ||||||||| || |||| || ||| || ||||| | Sbjct 2736473 CGAAGGCGCCAGGACGCTTATTGCCACCTTGGTCAACGTAGCGGGCAGTGTTGTTGAAGA 2736414 Query 139592 CGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCT----ACGGATGGGACTG 139647 | || | ||| ||| | || || | | || |||||||||| | | | | | | | Sbjct 2736413 CCCGGAGCATAGGCACAAGGCCATTGGAGGTGCCGTTGGTGCCGGCAATGTAAGAGCCAG 2736354 Query 139648 TTGC--GAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTA 139705 | || || |||| || ||||||| ||| || || || | | ||||| || | Sbjct 2736353 TAGCCCGAATTCGG------TGAACATTGAGGCCAATGCCACCAGCCATCTTGGAGATCA 2736300 Query 139706 AAACGCAA-TCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACC 139764 | ||||| || | | || || || || || |||||||| || | ||| ||| Sbjct 2736299 TAGCGCAAGTCTTG-AGCGTGTCATAGATGCCATCAATGCTGTCATCTTTCATGTCGACA 2736241 Query 139765 AGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCG 139824 |||||||| ||||| || || | | | || || || || || || || ||| Sbjct 2736240 AGAAAGCAAGACGATAGCTGAGCTTGAGGGGTACCAGCATTGAAGAGCGTGGGTGAGGCG 2736181 Query 139825 TGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTT 139884 || ||||| | | ||||||| | | ||| || || || ||| | |||||| Sbjct 2736180 TGAGTGAAAAACTTGCTCGACATGAGGTTGTAGGTCTCAATAACGCGCTCAATATTGTCA 2736121 Query 139885 CCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCC 139944 || ||| ||||||| ||| ||||| | ||| || || || || | | | ||| Sbjct 2736120 CCCCAGATGCCGACAGCGACGCGCATAATCATGTGCTGTGGACGCTCAACAATCTTGCCG 2736061 Query 139945 TCGAtttttttCAGATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGA 140002 | || || ||| || | || ||| ||||||||| |||||||||| ||||||| Sbjct 2736060 TTGAGCTTGAGCAGGTATGATCG--CTCCAGGGTCTTGAAGCCAAAGTATTGGTAGTTGA 2736003 Query 140003 AATC 140006 |||| Sbjct 2736002 AATC 2735999 >seq8 Length=2135075 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || ||||| ||||| || || || || || || || || ||| | Sbjct 385374 ATGCAGATCTTTGTCAAGACGCTCACCGGCAAGACCATCACCCTGGAGGTCGAGTCCAGC 385433 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || |||||| Sbjct 385434 GACACCATTGACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCGGATCAA 385493 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| ||||| || ||| |||||||| | | || || |||||| Sbjct 385494 CAGCGCCTGATCTTCGCCGGCAAGCAGTTGGAGGATGGTCGCACTCTGAGCGACTATAAC 385553 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || || ||||||||| | || | || || ||| Sbjct 385554 ATCCAGAAGGAGAGTACTCTCCACTTGGTGCTCCGTCTTCGTGGTGGC 385601 >seq6 Length=2850886 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || || ||||| ||||| || || || || || | | Sbjct 2704133 GATGCAGATCTTCGTGAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCTTC 2704192 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 2704193 CGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCA 2704252 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| || ||||||| || || || ||||| |||||| | | | || || || || Sbjct 2704253 ACAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAA 2704312 Query 24883 CATTCAAAAGGAATCGACACTACAC 24907 ||| || ||||| || || || ||| Sbjct 2704313 CATCCAGAAGGAGTCTACCCTCCAC 2704337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897335685160