Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09] 47 sequences; 32,403,370 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq8 100 3e-16 >seq8 Length=2135075 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||| | |||| |||| ||||| || || || |||||||| |||||| Sbjct 385144 CCACCGCGGAGACGAAGGACTAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 385085 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | |||| || || || || || ||||| ||||||| || || ||||| || || Sbjct 385084 AGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGATCCGGGGGA 385025 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 ||||| || || || ||| ||| || | | || | ||||| | | || || Sbjct 385024 ATGCCCTCCTTATCCTGAATCTTTGACTTGACGTTGTCGATAGTGTCAGACGACTCAACC 384965 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 |||| ||| | |||||||||||||| || || ||||| ||||||||| Sbjct 384964 TCAAGAGTGATGGTCTTGCCGGTCAAAGTCTTGACGAAGATTTGCATA 384917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488543712980400