Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09] 47 sequences; 32,403,370 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1 212 6e-50 seq6 118 1e-21 seq8 111 2e-19 seq2 89.7 5e-13 >seq1 Length=5810324 Score = 212 bits (234), Expect = 6e-50 Identities = 1121/1757 (64%), Gaps = 61/1757 (3%) Strand=Plus/Minus Query 148052 CGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTT---CAATGAGTCGCTT 148108 |||||| |||||| ||||| || |||||||| || ||||| | |||| | |||| Sbjct 2737705 CGACTGAGACTGGTCGATGAAAGCACCACGGTCTGCCGCCATCTGCACAATTTGGCGCTG 2737646 Query 148109 TATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGAT 148168 |||||||| | ||||||||||| ||||| || || || ||| | ||| Sbjct 2737645 AGAA---ATCTCCCAAACAGTCTTGTACAGGGCCTTGACATCGTCAGGGATGTTGGGGAT 2737589 Query 148169 GCGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTT 148228 | ||| | |||||| | |||| || | || ||| | || | | || Sbjct 2737588 GTTCTGGATGGAGCCGTTCTCGGCAATGATGCGGTTTTTCATAGCATCTGACCAAAGACC 2737529 Query 148229 GAGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCAC 148288 || || | || || | | ||| | | || || ||||| |||||||| || ||||| Sbjct 2737528 AAGTTCAACAAGATCCTTCAGCAGCCATGGGTTGACAACCTGGAACTCGCCAGCAAGCAC 2737469 Query 148289 GCGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTG 148348 || ||| | || | || ||| | || ||||| ||||||||||||| | |||||| Sbjct 2737468 ACGGCGCTGGTAGATATTCGAAGTATAGGGCTCAAAGCACTCGTTGTTGCCAAGAATCTG 2737409 Query 148349 CGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTT 148408 | || | || ||||||||| || | |||||| |||||| | || | | || Sbjct 2737408 TGATGTACTGGCAGTGGGCATGGGGGCAAGCAGCAGACTGTTGCGAATGCCATGCTCCTT 2737349 Query 148409 TATTTTGCGCTTCAGAGCCG-CCCAGTCCCAGAGCGGCGACGGTGTC-ACGTTCCACATG 148466 |||| ||| || || | |||||||||| || | || || | ||||||||||| Sbjct 2737348 GATTTGCTCCTTGAG-GCTGTCCCAGTCCCACAG-GTCGCTGGGCTTGACGTTCCACATA 2737291 Query 148467 TCGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGC 148526 ||||| |||||||| || | || ||| |||| | |||| ||| || || | Sbjct 2737290 TCGTATTGCAGAATACCTTCGGAGGCAGGGGAACCCTTGAACGACGAGTATGGGCCCTCA 2737231 Query 148527 GCCGCCGCCAGTTCG-CAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTG 148585 || || | || ||| | || | || ||| |||||| ||||| || || Sbjct 2737230 ACCTTGGCGATCTCAACAGAT-GCAGTTAAAGCAGCGTGGTAAATAGTCTCAAAGATCTG 2737172 Query 148586 CCTGTTGAGCA---GCGCCGC---CGACTCGCTTTCGTACGGCATACGCAGCCGCACAAA 148639 | |||||||| | ||| | ||||||| | |||| ||||| | || Sbjct 2737171 CTTGTTGAGCTCACGAGCCTCAGGCGACTCGA------AAGGCAGTCGCAGAGCAAGGAA 2737118 Query 148640 CGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCG 148699 ||||| || ||||| || || || || || ||||| ||||| |||||| | || Sbjct 2737117 GGCGTCAGCGAGGCCTTGAACACCGACACCGATGGGTCGGTGACGCATGTTGCTGTTACG 2737058 Query 148700 CGCGCTCTCGAGC-GGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCA 148758 || ||| | | ||||||||||| ||||| ||||||| |||||||| ||||| | Sbjct 2737057 TGC-CTCAGGGACAGGATAGTGGTTTACATCGATAATCTTGTTGAGATTGCGAACCACAA 2736999 Query 148759 CCTTTGTAATTCTGCGCAGCAATTCAAAATCGTA-CTTG--TCATCTACGATGC-ATCGG 148814 | | |||| | | ||||| | || ||| | | || ||||| | | | || Sbjct 2736998 CTTGGGTAACTTCGTGCAGCTTCTTGAAGTCGAAGCATGCATCATCGTAGTTAATAAAGG 2736939 Query 148815 TTCACGGCGATAGAG--GCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTA 148872 || | | |||| || || ||||| || || ||| || || || ||||| | Sbjct 2736938 CAGACAGAGCCAGAGAAGCAAGGTTGCAAACAGCAACCTCGTCAGGAGCAGAATACTCGA 2736879 Query 148873 CGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGC 148932 |||||| | ||| || ||| || ||| || | |||||| || |||||||| | Sbjct 2736878 TGATCTCAGTGCAAAGGTTGGAGCTGCGGATTGTACCAAGGTTCTTCTGGTTGCTCTTAC 2736819 Query 148933 TGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTA 148992 |||||| ||||||||||| |||||| | || ||||| || ||| | || | | Sbjct 2736818 GGTTGCAAGCGTCCTTGTAGAGCATGAATGGATTACCAGTCTCAGTCTGTGCCTCAAGGA 2736759 Query 148993 T---GAACCGATGCAGGTCCTGCGCGCGCACTTGCTGCT-CG-TAGCGA---CCCTCCTG 149044 | | ||| | || | ||| || |||| || | || | || |||||| Sbjct 2736758 TCGAGTACCAAAGC---TTCTGAGC-----CTTGATGGTGCGCTTGCCCTTGCCCTCCCT 2736707 Query 149045 CTCGTA--TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGG 149102 |||||| | ||| | ||| || || |||| || ||||| ||| | || || ||| Sbjct 2736706 CTCGTACTTCTCGTACAATGCC--TCAAATTCCTCACCATAGCAGTCGGCAAGGCCAGGG 2736649 Query 149103 CACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGA 149162 |||| | || |||||||| | |||| |||| | | | || |||||||| || ||| Sbjct 2736648 CACTCATTAGGACACATGAGTGTCCACTCGCCATTCTTTTCGACACGCTTCATGAAGAGA 2736589 Query 149163 TCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTG 149222 || || | ||| || ||| | || || || || || || ||| ||| Sbjct 2736588 TCCGGAATCCAAAGAGCGAGGAAAAGATCACGGGCACGAACCTCCTCTTTGCCATGGTTC 2736529 Query 149223 CGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGC 149282 || || | ||| | || | ||| | |||||| || |||| ||| | |||| Sbjct 2736528 TTACGGAGATCGAGGAACTCAAAGACGTCTGAGTGCCAGGGTTCAAGGTAAATGGCGAAG 2736469 Query 149283 GCGCCCTTGCGCTT---GCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGA 149339 ||||| ||||| ||| || ||||| |||| ||| | ||||||| || || || Sbjct 2736468 GCGCCAGGACGCTTATTGCCACCTTGGTCAACGTAGCGGGCAGTGTTGTTGAAGACCCGG 2736409 Query 149340 ACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCT 149399 | |||||| ||| |||| ||| |||||||| || | |||| | ||| || Sbjct 2736408 AGCATAGGCACAAGGCCATTGGAGGTGCCGTTGGTGCCGGCAATGTAAGAGCCAGTAGCC 2736349 Query 149400 CGCACTTTGTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCA-GT 149457 || | | ||| || |||| ||| ||||| || ||| | ||| ||||| ||||| || Sbjct 2736348 CGAATTCGGTGAACATTGAGGCCAATGCCACCAGCCAT-CTTGGAGATCATAGCGCAAGT 2736290 Query 149458 CGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACG 149517 | |||||| |||||||| || |||||||| |||||| | |||||||| | Sbjct 2736289 CTT-GAGCGTGTCATAGATGCCATCAATGCTGTCATCTTTCATGTCGACAAGAAAGCAAG 2736231 Query 149518 AGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAAT 149577 | | | || | | | || || || ||| | ||||| |||||| || ||| Sbjct 2736230 ACGATAGCTGAGCTTGAGGGGTACCAGCATTGAAGAGCGTGGGTGAGGCGTGAGTGAAAA 2736171 Query 149578 ATTT-CTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATG 149636 | || || | ||| | | ||| | ||| | ||||| || || | || || |||| Sbjct 2736170 ACTTGCTCGA-CATGAGGTTGTAGGTCTCAATAACGCGCTCAATATTGTCACCCCAGATG 2736112 Query 149637 CCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTG 149696 || | ||||||||||| | ||| ||||| || ||||| | | ||| | ||| Sbjct 2736111 CCGACAGCGACGCGCATAATCATGTGCTGTGGACGCTCAACAATCTTGCCGTTGAGCTTG 2736052 Query 149697 AGCAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCG 149756 |||| ||| || || |||||| |||||||||| | ||||| || || ||| || Sbjct 2736051 AGCAGGTATGATCGCTCCAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAATCACGGTCG 2735992 Query 149757 TGGTCAATGGCGGCGTC 149773 | | || |||| ||| Sbjct 2735991 TACACGATCGCGGAGTC 2735975 >seq6 Length=2850886 Score = 118 bits (130), Expect = 1e-21 Identities = 147/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || ||||| |||| || ||| | | | ||||| |||||||||| Sbjct 2704331 GGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCAAGCTGCTTGC 2704273 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||| ||||| || || ||||| |||||||| |||||| || Sbjct 2704272 CAGCGAAGATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACT 2704213 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||||| | |||||| || | ||||| || || || || || | Sbjct 2704212 TGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCCGTGAGGG 2704153 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 2704152 TCTTCACGAAGATCTGCAT 2704134 >seq8 Length=2135075 Score = 111 bits (122), Expect = 2e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| |||| || ||| ||| | ||||| ||||||||||| Sbjct 385114 GTAGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCA-TCCTCAAGCTGCTTGCC 385056 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||| || || || || ||||| ||||| || |||||| ||| Sbjct 385055 AGCGAAGATCAGGCGCTGTTGATCCGGGGGAATGCCCTCCTTATCCTGAATCTTTGACTT 384996 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||| | | ||| || || | |||| ||| |||||||||| ||| Sbjct 384995 GACGTTGTCGATAGTGTCAGACGACTCAACCTCAAGAGTGATGGTCTTGCCGGTCAAAGT 384936 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 384935 CTTGACGAAGATTTGCAT 384918 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| || ||||| |||| || ||| | | | ||||| |||||||| || ||| Sbjct 385337 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCA-TCCTCAAGCTGCTTACCAGCGA 385279 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 |||| || ||||| || || || || || || ||||| || ||||| ||| | | Sbjct 385278 AAATCAGGCGCTGTTGATCCGGGGGAATACCCTCCTTATCCTGAATCTTGCTCTTCACGT 385219 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 || | ||||| | | ||| || |||| |||| || |||||||||||||| || | Sbjct 385218 TGTCGATGGTGTCAGATGACTCAACCTCGAGAGTGATTGTCTTGCCGGTCAGAGTCTTGA 385159 Query 133648 CGAAAATCTGCAT 133660 |||| || ||||| Sbjct 385158 CGAAGATTTGCAT 385146 Score = 84.2 bits (92), Expect = 2e-11 Identities = 125/175 (71%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| || || ||||| || ||||| ||| | ||| ||| | ||||| |||||||||| Sbjct 384887 GGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCA-TCCTCAAGCTGCTTGC 384829 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||| || || || || ||||| |||||||| |||||| || Sbjct 384828 CAGCGAAGATCAGGCGCTGTTGATCCGGGGGAATGCCCTCCTTGTCCTGAATCTTTGACT 384769 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | || | ||||||| || || || || | |||| ||| ||||| || Sbjct 384768 TGACGTTGTCGATGGTGTCGGAGGATTCGACCTCAAGAGTGATGGTCTTGCCAGT 384714 >seq2 Length=4113143 Score = 89.7 bits (98), Expect = 5e-13 Identities = 112/153 (73%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||| ||| | || || ||||| ||||| || || ||||| |||||| Sbjct 379844 TCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTG 379903 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||||| | || ||| || |||| ||||| | Sbjct 379904 TCCTGGATCTTCGACTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATG 379963 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGC 133658 || ||||| || | || || || ||| |||| Sbjct 379964 GTCTTGCCAGTTAACGTCTTAAC--AAAGCTGC 379994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420515990280