Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09] 47 sequences; 32,403,370 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq8 100 7e-16 >seq8 Length=2135075 Score = 100 bits (110), Expect = 7e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || |||||| | || || || |||||||| |||| || ||| | Sbjct 384942 ACCGGCAAGACCATCACTCTTGAGGTTGAGTCGTCTGACACTATCGACAACGTCAAGTCA 385001 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 |||||||| || || || || ||| ||||| || | || |||||||| || ||| Sbjct 385002 AAGATTCAGGATAAGGAGGGCATTCCCCCGGATCAACAGCGCCTGATCTTCGCTGGCAAG 385061 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | || ||||| | ||| || ||| |||||| ||||||| ||||||||||||||| Sbjct 385062 CAGCTTGAGGATGGTCGCACTCTGAGCGACTACAACATCCAGAAGGAGTCTACTCTTCAC 385121 Query 206374 CTTGT 206378 || || Sbjct 385122 CTAGT 385126 Score = 86.0 bits (94), Expect = 1e-11 Identities = 142/203 (70%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTG-- 206230 ||||| ||| ||| |||||||| || || || ||||| |||| || || || | | Sbjct 385377 CAGATCTTTGTCAAGACGCTCACCGGCAAGACCATCACCCTGGAGGTCGA--GTCCAGCG 385434 Query 206231 ACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTC 206290 |||| | || || ||| ||||| || || || || || ||| ||||| | Sbjct 385435 ACACCATTGACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCGGATCAAC 385494 Query 206291 AAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 206350 | | || ||||||||||| ||||||||||| ||||| | ||| || ||| || ||| Sbjct 385495 AGCGCCTGATCTTCGCCGGCAAGCAGTTGGAGGATGGTCGCACTCTGAGCGACTATAACA 385554 Query 206351 TCCAGAAAGAGTCTACTCTTCAC 206373 ||||||| ||| |||||| ||| Sbjct 385555 TCCAGAAGGAGAGTACTCTCCAC 385577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820088322287