Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09] 47 sequences; 32,403,370 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq8 122 8e-23 >seq8 Length=2135075 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||| || | ||||||||||| || ||||| || ||| | Sbjct 385600 CCACCACGAAGACGGAGCACCAAGTGGAGAGTACTCTCCTTCTGGATGTTATAGTCGCTC 385541 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || |||| |||||| || || || |||| ||||| || |||| ||| Sbjct 385540 AGAGTGCGACCATCCTCCAACTGCTTGCCGGCGAAGATCAGGCGCTGTTGATCCGGGGGA 385481 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||||| |||||| ||||| | | | | |||||||| || || ||| Sbjct 385480 ATACCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCAATGGTGTCGCTGGACTCGACC 385421 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||||| || || || || | || || ||||| |||||||| Sbjct 385420 TCCAGGGTGATGGTCTTGCCGGTGAGCGTCTTGACAAAGATCTGCAT 385374 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||| || | ||||||||||| || |||||||| ||| | Sbjct 385372 CCACCACGAAGACGGAGCACCAAGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGCTC 385313 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || ||||||||||| || || |||| ||||| || |||| ||| Sbjct 385312 AGAGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAAATCAGGCGCTGTTGATCCGGGGGA 385253 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | |||||| ||| ||||| ||||| |||| | | ||||| || || || Sbjct 385252 ATACCCTCCTTATCCTGAATCTTGCTCTTCA-CGTTGTCGATGGTGTCAGATGACTCAAC 385194 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | ||||| || || || |||| ||| || || || || ||||| Sbjct 385193 CTCGAGAGTGATTGTCTTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 385146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793335158760