Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09] 47 sequences; 32,403,370 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1 206 4e-48 >seq1 Length=5810324 Score = 206 bits (228), Expect = 4e-48 Identities = 794/1226 (65%), Gaps = 52/1226 (4%) Strand=Plus/Minus Query 69003 TAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACT 69062 ||| ||| ||| ||||| || || || |||| ||| ||||| || | || || || | Sbjct 2737204 TAAAGCAGCGTGGTAAATAGTCTCAAAGATCTGCTTGTTGAGCTCACGAGCCTC-AGGCG 2737146 Query 69063 A-TCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGA 69121 | ||||| || | | | || || || || || | || ||||| || | ||||| Sbjct 2737145 ACTCGAAAGGCAGTCGCAGAGCAAGGAAGGCGTCAGCGAGGCCTTGAACACCGACACCGA 2737086 Query 69122 TAGGTCTATGTCTCTTATTTGAACTTTCA-GCTTCTGGAATAGGATAATAATTAATATCT 69180 | |||| || | | | || | || | || || || | |||||| | || | ||| Sbjct 2737085 TGGGTCGGTGACGCATGTT-GCTGTTACGTGCCTCAGGGACAGGATAGTGGTTTACATCG 2737027 Query 69181 ATAATTTTATTAAGATTTCGGACTACTACTT---TAACCACGTCCTTTAGTTTGAGAAAA 69237 ||||| || || ||||| || || || |||| |||| ||| | || || || Sbjct 2737026 ATAATCTTGTTGAGATTGCGAACCACAACTTGGGTAACTTCGTGC---AGCTTCTTGAAG 2736970 Query 69238 TCAAATCGTCCATC----TA--TAACAAACATATTCAGTGCTACAGATGCTAGATTACAA 69291 || || | | |||| || ||| ||| | ||| || | ||| || || || ||| Sbjct 2736969 TCGAAGCATGCATCATCGTAGTTAATAAAGGCAGACAGAGCCAGAGAAGCAAGGTTGCAA 2736910 Query 69292 ACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTG 69351 || || ||||| | || | | ||| | || ||||| || || || || | | Sbjct 2736909 ACAGCAACCTCGTCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGG 2736850 Query 69352 ATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAAC 69411 || || || || || | ||| || ||||| ||| || ||||||||||| || || || Sbjct 2736849 ATTGTACCAAGGTTCTTCTGGTTGCTCTTACGGTTGCAAGCGTCCTTGTAGAGCATGAAT 2736790 Query 69412 GGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATT 69471 ||| ||||||| ||| |||| | || | || || | ||||| | ||| || || Sbjct 2736789 GGATTACCAGTCTCAGTCTGTGCCTCAAGGATCGAGTACCAAAGCTTCTGAGCCTTGATG 2736730 Query 69472 ACGGTCTTGTAACGCTT---CTCTTTTTCATA-TTGT-GTATATAGCCGTTCGAATTCAT 69526 | |||| | ||| ||| | || || || | ||| | ||| || ||||| Sbjct 2736729 GTGCGCTTG---CCCTTGCCCTCCCTCTCGTACTTCTCGTACAATGCC--TCAAATTC-- 2736677 Query 69527 CTCCCCAAA-CA-TCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATC 69584 ||| ||| | || || | | ||||| || ||||| |||||||| | || |||| | | Sbjct 2736676 CTCACCATAGCAGTCGGCAAGGCCAGGGCACTCATTAGGACACATGAGTGTCCACTCGCC 2736617 Query 69585 ATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCT 69644 || | | || || ||||| || ||||| |||||||||||||| | || ||||| | Sbjct 2736616 ATTCTTTTCGACACGCTTCATGAAGAGATCCGGAATCCAAAGAGCGAGGAAAAGATCACG 2736557 Query 69645 GGTTCTATTTTCTTCATTTCCTGTAttttttttA---AGATCGAGAAACTCCATAATATC 69701 || | | || || || || || || ||| |||||||| ||||| | | || Sbjct 2736556 GGCACGAACCTCCTCTTTGCC---ATGGTTCTTACGGAGATCGAGGAACTCAAAGACGTC 2736500 Query 69702 AGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATC 69761 || ||||| ||||| || || || || | | | || || || ||||| || || || || Sbjct 2736499 TGAGTGCCAGGGTTCAAGGTAAATGGCGAAGGCGCCAGGACGCTTATTGCCACCTTGGTC 2736440 Query 69762 TATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACC 69821 | ||| | ||||||||| || |||| | ||||| || | || ||||| || | || Sbjct 2736439 AACGTAGCGGGCAGTGTTGTTGAAGACCCGGAGCATAGGCACAAGGCCATTGGAGGTGCC 2736380 Query 69822 ATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCC 69881 || || || | ||| ||| || | || ||||| || | || || || || Sbjct 2736379 GTTGGTGCCGGCAATGTAAGAGCCAGTAGCCCGAATTCGGTGAACATTGAGGCCAATGCC 2736320 Query 69882 TCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCT 69941 || ||||| || ||||| | ||| ||| || | |||||||| || || || ||||| Sbjct 2736319 ACCAGCCATCTTGGAGATCATAGCGCAAGTCTTGAGCGTGTCATAGATGCCATCAATGCT 2736260 Query 69942 ATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGA---TGTATAGTTCCCGC 69998 |||||| |||||| | ||||| ||| |||| | | ||| || || || || Sbjct 2736259 GTCATCTTTCATGTCGACAAGAA---AGCAAGACGATAGCTGAGCTTGAGGGGTACCAGC 2736203 Query 69999 ATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTC 70058 ||| || | || || || ||||||||||| | || || | || ||||| || || Sbjct 2736202 ATTGAAGAGCGTGGGTGAGGCGTGAGTGAAAAACTTGCTCGACATGAGGTTGTAGGTCTC 2736143 Query 70059 AATAGCTGATTCTATAT----CCCACTGATGAATTCCTATCGCGACACGCATCAACATAT 70114 |||| | || |||| || | |||| || | ||||| ||||| | ||| | Sbjct 2736142 AATAACGCGCTCAATATTGTCACCCCAGATG----CCGACAGCGACGCGCATAATCATGT 2736087 Query 70115 GCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTT 70174 |||| || || || || | || || | || | |||||||||| ||||| || | Sbjct 2736086 GCTGTGGACGCTCAACAATCTTGCCGTTGAGCTTGAGCAGGTATGATCGCTCCAGGGTCT 2736027 Query 70175 TAAACCCAAAATAGTTGTA--TGAAA 70198 | || ||||| || | ||| ||||| Sbjct 2736026 TGAAGCCAAAGTATTGGTAGTTGAAA 2736001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908396441080