Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09] 47 sequences; 32,403,370 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1 158 1e-33 >seq1 Length=5810324 Score = 158 bits (174), Expect = 1e-33 Identities = 989/1568 (63%), Gaps = 29/1568 (2%) Strand=Plus/Minus Query 117999 ATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGG 118058 || ||||| |||||| |||| ||| ||| | ||| || ||||| | ||| || ||| Sbjct 2737641 ATCTCCCAAACAGTCTTGTACAGGGCCTTGACATCGTCAGGGATGTTGGGGATGTTCTGG 2737582 Query 118059 ATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTT 118118 ||||| || | | | ||| | | |||||| | | |||||| ||||||| | Sbjct 2737581 ATGGAGCCGTTCTCGGCAATGATGCGGTTTTTCATAGCATCTGACCAAAGACCAAGTTCA 2737522 Query 118119 TTGAGATCCTCCACGAG--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTC 118176 ||||||| || || ||| | ||||||| ||||| || || || || | Sbjct 2737521 ACAAGATCCTTCAGCAGCCATGGGT--TGACAACCTGGAACTCGCCAGCAAGCACACGGC 2737464 Query 118177 TCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTG 118236 | | |||||||| | || || |||||||||||||| ||||| || | || || | || Sbjct 2737463 GCTGGTAGATATTCGAAGTATAGGGCTCAAAGCACTCGTTGTTGCCAAGAATCTGTGATG 2737404 Query 118237 TGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGC 118296 | ||| ||||||||||| || | || || ||||| || | || | ||| | || Sbjct 2737403 TACTGGCAGTGGGCATGGGGGCAAGCAGCAGACTGTTGCGAATGCCATGCTCCTTGATTT 2737344 Query 118297 GTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACT 118356 | |||||||| ||||||||| | | | | || | | ||||||||| | | Sbjct 2737343 GCTCCTTGAGGCTGTCCCAGTCCCACAGGTCGCTGGGCTTGACGTTCCACATATCGTATT 2737284 Query 118357 GGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCG 118416 | || ||||||| ||| || || || |||| || | | |||||||||||||||| | Sbjct 2737283 GCAGAATACCTTCGGAGGCAGGGGAACCCTTGAACGACGAGTATGGGCCCTCAACCTTGG 2737224 Query 118417 CCAATTC-GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTC 118475 | | || || | || | || ||||| || || || ||||| || | || Sbjct 2737223 CGATCTCAACAGAT-GCAGTTAAAGCAGCGTGGTAAATAGTCTCAAAGATCTGCTTGTTG 2737165 Query 118476 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACA-AAATAAATACATCCGCGAG 118534 | | ||||| || || || | |||| ||| | || || | || ||||| Sbjct 2737164 AGCTCACGAGCCTCAGGCGACTCGAAAGGCAGTC-GCAGAGCAAGGAAGGCGTCAGCGAG 2737106 Query 118535 ACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC--- 118591 ||||| ||||||| || || || || || | ||| || || || || ||| Sbjct 2737105 GCCTTGAACACCGACACCGATGGGTCGGTGACGCATGTTGCTGTTACGTGC---CTCAGG 2737049 Query 118592 CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGAT 118651 || ||||| || |||||||| | | || ||||| ||||| | || | Sbjct 2737048 GACAGGATAGTGGTTTACATCGATAATCTTGTTGAGATTGCGAACCACAACTTGGGTAAC 2736989 Query 118652 TTCATGAAGCTTTTCGTAATCAAAAC-TGCGAGTCTCTTCATTGACATACTTAGGAAGGG 118710 ||| || ||||| | | | || || | ||| | || | || | | | || || | Sbjct 2736988 TTCGTGCAGCTTCTTGAAGTCGAAGCATGC-ATCATCGTAGTTAATAAAGGCAGACAGAG 2736930 Query 118711 CGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCG 118770 | | || || || || || |||| ||| || | ||| ||||| || || || | Sbjct 2736929 CCAGAGAAGCAAGGTTGCAAACAGCAACCTCGTCAGGAGCAGAATACTCGATGATCTCAG 2736870 Query 118771 TGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACG 118830 |||| | ||| || || || || || | |||||| || || ||| ||| || | Sbjct 2736869 TGCAAAGGTTGGAGCTGCGGATTGTACCAAGGTTCTTCTGGTTGCTCTTACGGTTGCAAG 2736810 Query 118831 CATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCC 118890 | |||||||| |||||| |||| | || ||||| || || | || || || | | || Sbjct 2736809 CGTCCTTGTAGAGCATGAATGGATTACCAGTCTCAGTCTGTGCCTCAAGGATCGAGTACC 2736750 Query 118891 AGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAG 118949 | | | || | ||| | ||| ||| | ||||| ||||||||| ||| Sbjct 2736749 AAAGCTTCTG-AGCCTTGATGGTGCGCTTGCCCTTGCCCTCCCTCTCGTACTTCTCGTAC 2736691 Query 118950 AGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAG 119009 | || ||||| || ||||| | || | || || || || || || || | | Sbjct 2736690 AATGCCTCAAATTCCTCACCATAGCAGTCGGCAAGGCCAGGGCACTCATTAGGACACATG 2736631 Query 119010 AGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCC 119069 || | ||| | ||| || || || |||||||||||||| || || ||||| || || Sbjct 2736630 AGTGTCCACTCGCCATTCTTTTCGACACGCTTCATGAAGAGATCCGGAATCCAAAGAGCG 2736571 Query 119070 GAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 119129 ||| ||||| || ||| | || || | || || || ||| | || | || Sbjct 2736570 AGGAAAAGATCACGGGCACGAACCTCCTCTTTGCCATGGTTCTTACGGAGATCGAGGAAC 2736511 Query 119130 TCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGA 119186 || | || || | |||||| ||||| ||||| | |||| | || ||| | Sbjct 2736510 TCAAAGACGTCTGAGTGCCAGGGTTCAAGGTAAATGGCGAAGGCGCCAGGACGCTTATTG 2736451 Query 119187 CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCA 119246 ||| | |||| || || | |||||| ||| || || || ||||| || | | ||| Sbjct 2736450 CCACCTTGGTCAACGTAGCGGGCAGTGTTGTTGAAGACCCGGAGCATAGGCACAAGGCCA 2736391 Query 119247 TCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATC-GTGGATGTG 119305 | ||| ||| || || || ||| ||| | | || | || || ||| | | Sbjct 2736390 TTGGAGGTGCCGTTGGTGCCGGCAATGTAAGAGCCAGTAGC-CCGAATTCGGTGAACATT 2736332 Query 119306 CATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGAT 119365 | ||||| || || ||| ||| ||||| ||||| | |||| || | ||||| Sbjct 2736331 GAGGCCAATGCCACCAGCCATCTTGGAGATCATAGCGCAAGTCTTGAGCGTGTCATAGAT 2736272 Query 119366 CCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-G 119424 ||||| || |||| | || | ||| || ||||| ||| | ||| || || | Sbjct 2736271 GCCATCAATGCTGTCATCTTTCATGTCGACAAGAAAGCAAGACGATAGCTGA-GCTTGAG 2736213 Query 119425 GTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTT 119482 | |||||||| |||||||| || |||| ||||| ||| | | |||| ||||| Sbjct 2736212 GGGTACCAGCATTGAAGAGCGTGGGTGAGGCGTGAGTGA--AAAACTTGCTCGACATGAG 2736155 Query 119483 GTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCAT 119542 || ||||||||| | ||| ||| | || || || |||| | ||| ||||| Sbjct 2736154 GTTGTAGGTCTCAATAACGCGCTCAATATTGTCACCCCAGATGCCGACAGCGACGCGCAT 2736095 Query 119543 AAACATGT 119550 || ||||| Sbjct 2736094 AATCATGT 2736087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434836669320