Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09] 47 sequences; 32,403,370 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1 289 3e-73 seq8 183 3e-41 seq6 152 6e-32 seq2 125 8e-24 seq4 93.3 5e-14 >seq1 Length=5810324 Score = 289 bits (320), Expect = 3e-73 Identities = 1158/1799 (64%), Gaps = 63/1799 (4%) Strand=Plus/Minus Query 79987 GCCGCCTGATCAACGGGTACCGTCACCTGAATTGGCTTGGCCTTTGCCCGCGTCCGCAGA 80046 || ||||||||||| | | | |||||| || ||| ||| |||| ||||| Sbjct 2737851 GCTGCCTGATCAACAG------TGAACTGAATCGGAGCGGCAGCAGCCTGCGTGCGCAGG 2737798 Query 80047 TAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGCTTC 80106 ||||||||||| |||||||| || |||||| || | ||||| ||| ||| Sbjct 2737797 TAGTACATGCCAGTCTTGAGTCCAAGCTTCCATCCTGTGAAATGCATGCTGGTGATCTTG 2737738 Query 80107 GCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATGAAAGCCCCA 80166 | | |||||| || |||| |||||| || ||||||||||| ||||||||| ||| Sbjct 2737737 CCCATGCTGGGGTCCTTCATGTGGATGTTGAGCGACTGAGACTGGTCGATGAAAGCACCA 2737678 Query 80167 CGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGTACGATACA-- 80224 || ||||||||||| | | |||| || | ||| ||||| || || |||| Sbjct 2737677 CGGTCTGCCGCCATCTGCACAATTTGGCGCTGAGAAATCTCCCAAACAGTCTTGTACAGG 2737618 Query 80225 -CCTTACGAAGCTCCTCTGGAATGTCCAGATTTTGCACACTGCCACCGTCCTTTACAATT 80283 |||| | || || || |||| | | | | || |||| || |||| Sbjct 2737617 GCCTTGACA---TCGTCAGGGATGTTGGGGATGTTCTGGATGGAGCCGTTCTCGGCAATG 2737561 Query 80284 T---GATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAGATCTTTCACAAGGT-- 80338 | ||||||| || | ||| | |||||| | ||||| |||| || Sbjct 2737560 ATGCGGTTTTTCATAGCATCTGACCAAAGACCAAGTTCAACAAGATCCTTCAGCAGCCAT 2737501 Query 80339 -GCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGATACAGGTTTGTAGTG 80397 | ||| || | || |||| || || || || ||| | || | || | ||| Sbjct 2737500 GGGTTGACAACCTGGA---ACTCGCCAGCAAGCACACGGCGCTGGTAGATATTCGAAGTA 2737444 Query 80398 TAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGG 80457 || |||||||| ||||||||| || || ||||| | || || || || ||||| ||| Sbjct 2737443 TAGGGCTCAAAGCACTCGTTGTTGCCAAGAATCTGTGATGTACTGGCAGTGGGCATGGGG 2737384 Query 80458 CCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCAAATCTGACCAA 80517 | | || ||| || || | ||| |||| |||||| | ||| | | ||| || | Sbjct 2737383 GCAAGCAGCAGACTGTTGCGAATGCCATGCTCCTTGATTTGCTC-CTTGAGGCTGTCCCA 2737325 Query 80518 AAATCAACCCCAA--CGCTG----TGACC--CCACATGTCGTGCTGCAAGATGCCCTCCG 80569 || || || ||||| |||| |||||| |||| |||| || || || | Sbjct 2737324 G--TC--CCACAGGTCGCTGGGCTTGACGTTCCACATATCGTATTGCAGAATACCTTCGG 2737269 Query 80570 ACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGACT 80629 | || || || ||| ||||| | ||| |||||||| |||||| | |||| || Sbjct 2737268 AGGCAGGGGAACCCTTGAACGACGAGTATGGGCCCTCAACCTTGGCGATCTCAACAGATG 2737209 Query 80630 CCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGTG 80689 | | | || ||||| ||||| |||||||| |||||| | | || |||| | Sbjct 2737208 CAGTTAAAGCAGCGTGGTAAATAGTCTCAAAGATCTGCTTGTTGAGCTCACGAGCCTCAG 2737149 Query 80690 GGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGG 80749 | ||||| | || | || | ||| ||||||| ||||| ||||| |||| Sbjct 2737148 GCGACTCGAAAGGCAGTCGCAGAGCAAGGAAGGCGTCAGCGAGGCCTTGAACACCGACAC 2737089 Query 80750 CGATCGGGCGGTGGCGCTTGTTCGATCGCTCG-GCCTCCGGAATTGGGTAAAAGTTATTA 80808 |||| || ||||| ||| |||| | | || ||||| || | || || ||| | Sbjct 2737088 CGATGGGTCGGTGACGCATGTT-GCTGTTACGTGCCTCAGGGACAGGATAGTGGTTTACA 2737030 Query 80809 TCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAG 80868 ||||| | ||| || ||||| ||||| | ||||| || || || |||| ||| Sbjct 2737029 TCGATAATCTTGTTGAGATTGCGAACCACAACTTGGGTAACTTCGTGCAGCTTCTTGAAG 2736970 Query 80869 TCGAAT--TGGTTCCCC----TTCACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCAC 80922 ||||| || || | || | ||| || | || ||| || || || ||||| Sbjct 2736969 TCGAAGCATGCATCATCGTAGTTAATAAAGGCAGACAGAGCCAGAGAAGCAAGGTTGCAA 2736910 Query 80923 ACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTA 80982 || || ||||| |||| | | | | |||||| ||| || ||||| | || || Sbjct 2736909 ACAGCAACCTCGTCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGG 2736850 Query 80983 ATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTAC 81042 |||||||| ||||| |||||||| ||| ||||||||||||||||||| |||| | Sbjct 2736849 ATTGTACCAAGGTTCTTCTGGTTGCTCTTACGGTTGCAAGCGTCCTTGTAGAGCATGAAT 2736790 Query 81043 GGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACC 81102 || |||| ||||| ||||| || ||||| | || ||||| || | |||||| Sbjct 2736789 GGATTACCAGTCTCAGTCTGTGCCTCAAGGATCGAGTACCAAAGCTTCTGAGCCTTG--- 2736733 Query 81103 ACCTTGCG---GAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGCA 81159 | |||| | ||||| || | | ||||| |||| | | || || | || Sbjct 2736732 ATGGTGCGCTTGCCCTTGCCCTCCCTCTCGTACTTCTCGTACAATGCCTCAAATTCCTCA 2736673 Query 81160 CCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTC 81218 || | | || || | ||| | |||||||| ||||| ||||| || ||| ||| | Sbjct 2736672 CCATAGCAG-TCGGCAAGGCCAGGGCACTCATTAGGACACATGAGTGTCCACTCGCCATT 2736614 Query 81219 GTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCA 81278 || || ||| ||||||||| || || ||||| || ||| ||| || || ||| Sbjct 2736613 CTTTTCGACACGCTTCATGAAGAGATCCGGAATCCAAAGAGCGAGGAAAAGATCACGGGC 2736554 Query 81279 GCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATG 81338 || ||||||| | || ||||| || | ||||| || || | || ||| | || Sbjct 2736553 ACGAACCTCCTCTTTGCCATGGTTCTTACGGAGATCGAGGAACTCAAAGACGTCTGAGTG 2736494 Query 81339 CCATGGCTCCAGATACACGGCGATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTA 81395 ||| || || || || | ||||| | || || | |||||| |||| ||||| Sbjct 2736493 CCAGGGTTCAAGGTAAATGGCGAAGGCGCCAGGACGCTTATTGCCACCTTGGTCAACGTA 2736434 Query 81396 ACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGT 81455 |||||||| ||| || || || | |||||| | | |||| || ||||| || Sbjct 2736433 GCGGGCAGTGTTGTTGAAGACCCGGAGCATAGGCACAAGGCCATTGGAGGTGCCGTTGGT 2736374 Query 81456 ACCCACGATACGCGACCCCTTGGCGCGCA--CCTTGCTGATTGAAAGACCGATGCCACCT 81513 || | || || || | || || | | || |||| || || |||||||| Sbjct 2736373 GCCGGCAATGTAAGAGCCAGTAGCCCGAATTCGGTGAACATTG--AGGCCAATGCCACCA 2736316 Query 81514 GACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCT 81573 | | ||| || ||| ||| || || | || ||||| || || || ||||| || Sbjct 2736315 GCCATCTTGGAGATCATAGCGCAAGTCTTGAGCGTGTCATAGATGCCATCAATGCTGTCA 2736256 Query 81574 TTTTTCATGTCAAGCAAGAAA-CAGCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTG 81630 | ||||||||| | ||||||| || || | |||| |||| | | || |||||| Sbjct 2736255 TCTTTCATGTCGA-CAAGAAAGCAAGACGATAGCTGA--GCTTGAGGGGTACCAGCATTG 2736199 Query 81631 AACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTG 81690 || || || || | |||||| ||||| | | | ||||| |||| ||||| || | Sbjct 2736198 AAGAGCGTGGGTGAGGCGTGAGTGAAAAACTTGCTCGACATGAGGTTGTAGGTCTCAATA 2736139 Query 81691 ACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGTACTGGGG 81749 ||||| ||||| |||||| || |||| ||| || ||||||| ||||| ||| || Sbjct 2736138 ACGCGCTCAATATTGTCACCCCAGATGCCGACAGCGACGCGCATAATCATGTGCTGTGG 2736080 >seq8 Length=2135075 Score = 183 bits (202), Expect = 3e-41 Identities = 179/228 (79%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| | ||||||||||| || ||||||||||||||||| | Sbjct 384918 ATGCAAATCTTCGTCAAGACTTTGACCGGCAAGACCATCACTCTTGAGGTTGAGTCGTCT 384977 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | || |||||||| |||||||| ||||| || || || Sbjct 384978 GACACTATCGACAACGTCAAGTCAAAGATTCAGGATAAGGAGGGCATTCCCCCGGATCAA 385037 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || || ||||| ||||| || ||||||| ||| || || ||| ||||| || Sbjct 385038 CAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACTCTGAGC-GACTACAA 385096 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || |||||||| |||||| | ||||| |||||||| Sbjct 385097 CATCCAGAAGGAGTCTACTCTTCACCTAGTCCTTCGTCTCCGCGGTGG 385144 Score = 170 bits (188), Expect = 2e-37 Identities = 176/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || ||||||||||| || ||||| |||||||||||| | Sbjct 385146 ATGCAAATCTTCGTCAAGACTCTGACCGGCAAGACAATCACTCTCGAGGTTGAGTCATCT 385205 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || ||||| || |||||||| |||||||| ||||| || || || Sbjct 385206 GACACCATCGACAACGTGAAGAGCAAGATTCAGGATAAGGAGGGTATTCCCCCGGATCAA 385265 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || ||||| ||||||||||| || ||||||| || || || ||| ||||| || Sbjct 385266 CAGCGCCTGATTTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACTCTGAGC-GACTACAA 385324 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || | || | |||||||| ||||| Sbjct 385325 CATCCAGAAGGAGAGTACTCTCCACTTGGTGCTCCGTCTTCGTGGTGG 385372 Score = 161 bits (178), Expect = 1e-34 Identities = 176/231 (76%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||||||||||||||| ||||||||||| || || || ||||| ||||| | Sbjct 385374 ATGCAGATCTTTGTCAAGACGCTCACCGGCAAGACCATCACCCTGGAGGTCGAGTCCAGC 385433 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| ||||| || || |||||||||||||| ||||| || || || Sbjct 385434 GACACCATTGACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCGGATCAA 385493 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || || || || ||||| | ||||||| ||| || || ||| |||||||| Sbjct 385494 CAGCGCCTGATCTTCGCCGGCAAGCAGTTGGAGGATGGTCGCACTCTGAGC-GACTATAA 385552 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| ||||| || | || | |||||||| ||||| || Sbjct 385553 CATCCAGAAGGAGAGTACTCTCCACTTGGTGCTCCGTCTTCGTGGTGGCCA 385603 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || |||||||| || ||||||||||| || || || | ||| | || | ||| | Sbjct 384714 ACTGGCAAGACCATCACTCTTGAGGTCGAATCCTCCGACACCATCGACAACGTCAAGTCA 384773 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || ||||||||||||||||| ||||| || || || ||||| || || || ||||| ||| Sbjct 384774 AAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAACAGCGCCTGATCTTCGCTGGCAAG 384833 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || ||||||| ||| ||||| | ||||| || |||| |||||||| || || || Sbjct 384834 CAGCTTGAGGATGGTCGCACCCTTTCCGACTACAACATCCAGAAGGAATCTACCCTCCAC 384893 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || || | || || || || || Sbjct 384894 CTGGTTCTCCGCCTCCGTGGCGG 384916 >seq6 Length=2850886 Score = 152 bits (168), Expect = 6e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || || |||||||| || |||||||| ||||| Sbjct 2704134 ATGCAGATCTTCGTGAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCTTCC 2704193 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| | || || |||||||||||||| ||||| || ||||| Sbjct 2704194 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAA 2704253 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || || ||||| ||||| || ||||||| || ||||| ||| ||||| || Sbjct 2704254 CAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGAGC-GACTACAA 2704312 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || ||| | || ||||| ||||| Sbjct 2704313 CATCCAGAAGGAGTCTACCCTCCACCTCGTCCTCCGCCTTCGTGGTGG 2704360 >seq2 Length=4113143 Score = 125 bits (138), Expect = 8e-24 Identities = 137/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 |||||| |||||| | || |||||||| || || || ||||| ||||| || | ||| Sbjct 379990 CTTTGTTAAGACGTTAACTGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCAT 379931 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| | ||| | || || |||||||||||||| ||||| || ||||| ||||| || Sbjct 379930 CGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAACAGCGCCT 379871 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || || ||||| ||||| || ||||||| || ||||| | ||||| || |||| || Sbjct 379870 GATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAA 379811 Query 27594 GG 27595 || Sbjct 379810 GG 379809 >seq4 Length=3262506 Score = 93.3 bits (102), Expect = 5e-14 Identities = 182/269 (68%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCG 32043 || ||||| |||||| || ||||| || || || | |||| |||||| Sbjct 1738093 GATGGCCTGAAGCCTGGCCAACGCAAAGTCATGTATGGTGTTTTCAAACGTAACCTGGTC 1738152 Query 32044 AGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCAC 32103 | |||| |||||| | | || |||| ||||| | | ||||||| || |||||| Sbjct 1738153 AAAGACAAGAAGGTTGTAGACCTCGCGGGTTACGTCTCCGGCGAAACGGCATACCACCAC 1738212 Query 32104 GGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAAT 32163 || || | ||| || ||| |||||| | |||||||||||||| ||||||| | || Sbjct 1738213 GGTGATGTGTCACTGCAGCAGACCATTATTGGCCTTGCTCAGAACTATGTCGGTTCGAAC 1738272 Query 32164 AACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGAT 32223 ||| | |||| || ||||| ||| ||| || | || || || |||| ||| Sbjct 1738273 AACATCAACTGCCTTGAGCCCAGTGGCATGTTCGGTTCTCGTCTTCAAGGAGGCAGCGAT 1738332 Query 32224 GCTGCGAGCTCCCGTTACATCTTCACCCG 32252 ||||| ||| | |||||||| | ||| || Sbjct 1738333 GCTGCCAGCCCTCGTTACATTTACACGCG 1738361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310064942640