Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09] 47 sequences; 32,403,370 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq8 84.2 2e-11 >seq8 Length=2135075 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/188 (71%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 29628 CCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCA 29687 ||||||| | ||||| || | ||| || |||||||||||||| || || ||||||| Sbjct 2068694 CCCTCTCAACCTGAACTTGTAGAGCTTCAACATGGTCAAGGTAGACATGTGCGTCTCCCA 2068635 Query 29688 GGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGG 29746 | ||| | ||||| || || | || | | | || || ||||||| ||||| Sbjct 2068634 TGACGTGTGTTAAACTG-CCAGGAACCAGATCACAGGCATGCGCAATCATGTGGGTGAGC 2068576 Query 29747 AGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAG 29806 || | || ||||||||||| || || || || || ||||| || | || | |||||| Sbjct 2068575 AGTGCATAACTGGCGATGTTGAATGGGACACCTAGACCCATATCGCAAGATCGCTGGTAC 2068516 Query 29807 AGCTGGCA 29814 |||||||| Sbjct 2068515 AGCTGGCA 2068508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406162967344642