Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09] 47 sequences; 32,403,370 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1 208 1e-48 >seq1 Length=5810324 Score = 208 bits (230), Expect = 1e-48 Identities = 625/950 (66%), Gaps = 36/950 (4%) Strand=Plus/Minus Query 76271 AGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATC 76330 ||||| | ||| || || || ||||| || ||||| | || | | ||| | || ||| Sbjct 2736933 AGAGCCAGAGAAGCAAGGTTGCAAACAGCAACCTCGTCAGGAGCAGAATACTCGATGATC 2736874 Query 76331 TCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTA 76390 || ||||| || || | ||| || ||||| || | ||||||||||| ||| Sbjct 2736873 TCAGTGCAAAGGTTGGAGCTGCGGATTGTACCAAGGTTCTTCTGGTTGCTCTTACGGTTG 2736814 Query 76391 CATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGAT 76450 || | |||||| || || | || ||| | ||||| ||| |||||| || | || || Sbjct 2736813 CAAGCGTCCTTGTAGAGCATGAATGGATTACCAGTCTCAGTCTGTGCCTCAAGGATCGAG 2736754 Query 76451 TTCCAGACGACTCT-AGCTTTTATTATAGATTTGTATCGCTT---CTCTCTTTCATA-TT 76505 | ||| | | ||| ||| || || | ||| | ||| ||| || || || || Sbjct 2736753 TACCAAA-GCTTCTGAGCCTTGATGGTGCGCTTG---CCCTTGCCCTCCCTCTCGTACTT 2736698 Query 76506 GT-GTATATAACCGTTCAAATTCATCTCCCCAAA-CA-TCATCCAAACCAGGACATTCAT 76562 | ||| | || |||||||| ||| ||| | || || | | ||||| || |||| Sbjct 2736697 CTCGTACAATGCC--TCAAATTC--CTCACCATAGCAGTCGGCAAGGCCAGGGCACTCAT 2736642 Query 76563 TCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTA 76622 | |||||||| | || |||||| |||| | | || || ||||| |||||||| || | Sbjct 2736641 TAGGACACATGAGTGTCCACTCGCCATTCTTTTCGACACGCTTCATGAAGAGATCCGGAA 2736582 Query 76623 TCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAA 76682 |||| ||||| | || ||||| |||| | | || || || || ||||| | Sbjct 2736581 TCCAAAGAGCGAGGAAAAGATCACGGGCACGAACCTCCTCTTTGCCATGGTTCTTACGGA 2736522 Query 76683 GATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCG 76742 |||| |||||||| | | || || ||||| ||||| || || || || | | || | Sbjct 2736521 GATCGAGGAACTCAAAGACGTCTGAGTGCCAGGGTTCAAGGTAAATGGCGAAGGCGCCAG 2736462 Query 76743 GTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTG 76802 | || ||||| || || || || | || | ||||||||| || | || | | ||| | Sbjct 2736461 GACGCTTATTGCCACCTTGGTCAACGTAGCGGGCAGTGTTGTTGAAGACCCGGAGCATAG 2736402 Query 76803 GAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATAT 76862 | | || ||| || || || || || || || | ||| ||| ||| || ||||| Sbjct 2736401 GCACAAGGCCATTGGAGGTGCCGTTGGTGCCGGCAATGTAAGAGCCAGTAGCCCGAATTC 2736342 Query 76863 TACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATG 76922 || | ||||| || || || ||||| || ||||| | ||| || || | | Sbjct 2736341 GGTGAACATTGAGGCCAATGCCACCAGCCATCTTGGAGATCATAGCGCAAGTCTTGAGCG 2736282 Query 76923 TGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTT 76982 ||||||||||||| || || || ||||| |||||| | ||||| ||| |||| | Sbjct 2736281 TGTCATAGATGCCATCAATGCTGTCATCTTTCATGTCGACAAGAA---AGCAAGACGATA 2736225 Query 76983 GATGA---TGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTT 77039 | ||| ||| || || ||||| || | || || || || |||||||| | || Sbjct 2736224 GCTGAGCTTGAGGGGTACCAGCATTGAAGAGCGTGGGTGAGGCGTGAGTGAAAAACTTGC 2736165 Query 77040 CAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATAT------CCCATTGATGAATTC 77093 || | || ||||| || |||||||| || |||| |||| |||| | Sbjct 2736164 TCGACATGAGGTTGTAGGTCTCAATAACGCGCTCAATATTGTCACCCCA--GATG----C 2736111 Query 77094 CTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCA 77153 | |||||||| ||||| | ||| ||||| || || || ||| |||| || | || | Sbjct 2736110 CGACAGCGACGCGCATAATCATGTGCTGTGGACGCTCAACAATCTTGCCGTTGAGCTTGA 2736051 Query 77154 ACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAA 77201 || ||||||| |||| || || || ||||| || | ||| ||||| Sbjct 2736050 GCAGGTATGATCGCTCCAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAA 2736001 Score = 84.2 bits (92), Expect = 3e-11 Identities = 150/218 (69%), Gaps = 1/218 (0%) Strand=Plus/Minus Query 75373 CAAC-GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431 |||| ||||||||||| |||| || || | | || || || |||||||| ||||| | Sbjct 2737841 CAACAGTGAACTGAATCGGAGCGGCAGCAGCCTGCGTGCGCAGGTAGTACATGCCAGTCT 2737782 Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGG 75491 | || || || ||||||| |||||||||||| || | ||| || || || Sbjct 2737781 TGAGTCCAAGCTTCCATCCTGTGAAATGCATGCTGGTGATCTTGCCCATGCTGGGGTCCT 2737722 Query 75492 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 75551 || || || || | ||||||| || ||||||||||| || | || |||||||| | Sbjct 2737721 TCATGTGGATGTTGAGCGACTGAGACTGGTCGATGAAAGCACCACGGTCTGCCGCCATCT 2737662 Query 75552 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTG 75589 | ||| |||| ||| ||||||| ||| ||| Sbjct 2737661 GCACAATTTGGCGCTGAGAAATCTCCCAAACAGTCTTG 2737624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933981151040