Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07-
21] 176 sequences; 43,437,139 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq99 228 8e-55
seq165 150 2e-31
seq121 120 3e-22
>seq99
Length=2343619
Score = 228 bits (252), Expect = 8e-55
Identities = 284/384 (74%), Gaps = 4/384 (1%)
Strand=Plus/Plus
Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041
|||||||||| ||||| || |||||||| |||| | | |||||| |||||| ||||||
Sbjct 2126803 AGAAGGCCGACTGGGCTCTTCGCTGGATTGCCGACCGCGAGGCCACCTTCGCTCAGCGCC 2126862
Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101
| || |||||||| ||||||||||| ||||||| || |||||| |||| || |
Sbjct 2126863 TCGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATTTTCT 2126922
Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161
|||||||||| |||||||| ||||| || || || ||| ||| |||||||||||| | |
Sbjct 2126923 GGCTCAAGAAGCGCGGCCTTATGCCTGGTCTTACCTTCTCCAATGAGCTCATCTCCCGTG 2126982
Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221
|||||||||| || |||||| || || | |||||| || | ||| || ||
Sbjct 2126983 ACGAGGGTCTCCACACCGACTTCGCGTGCCTCCTGTTCTCCCACCTCAAGCACCGCCCCG 2127042
Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281
| | || | ||| ||| ||| | || || || ||| ||||||||| |||||||
Sbjct 2127043 ACAAGCAGCTCATCAAGGACATCATTACTGATGCCGTCAAGATCGAGCAGGAGTTCCTCA 2127102
Query 117282 CCGAAGCGCT-GCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACAT 117339
| || || || || |||| ||||| || | || ||||| | ||| ||| |||||
Sbjct 2127103 CTGAGGCCCTCCCCTGTGC-CCTGCTCGGCATGAA-CGCGAACCTCATGAAGCAGTACAT 2127160
Query 117340 CGAGTTCGTCGCCGACAGGCTGCT 117363
|||||||||||||||||||||||
Sbjct 2127161 TGAGTTCGTCGCCGACAGGCTGCT 2127184
Score = 163 bits (180), Expect = 3e-35
Identities = 212/287 (74%), Gaps = 7/287 (2%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||||||||| || |||||||| | ||| ||| | || ||
Sbjct 2126379 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAAGAGATTGATCTC 2126438
Query 116696 TCCAAGGA-CACGAGCGACTGGGAGCGCTTG---AACGACAACGAGCGCCATTTCATCAA 116751
|||||||| | | | ||||||| | | | || || ||||| ||||||||
Sbjct 2126439 TCCAAGGATCTCCA-CGACTGGAACAACAAGCTCAATGATGACGAGAAGTATTTCATCTC 2126497
Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811
|||| | || ||||| ||||||||| ||| || |||||||||||||| || || |||||
Sbjct 2126498 GCACATTCTTGCCTTCTTCGCCGCCTCCGATGGTATCGTCAACGAGAACCTCGTTGAGCG 2126557
Query 116812 TTTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCA 116870
||| || | ||||| ||| | | ||||| || ||||||||||| || |||||| |
Sbjct 2126558 ATTCAGCGC-TGAGGTCCAGATCCCTGAGGCCCGCTGCTTCTACGGTTTCCAGATCATGA 2126616
Query 116871 TGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917
|||||||| | |||||||| | || || |||||| || || |||
Sbjct 2126617 TGGAGAACATCCACTCGGAGACCTACTCCCTCCTCATTGATACCTAC 2126663
>seq165
Length=1469810
Score = 150 bits (166), Expect = 2e-31
Identities = 161/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745
||| |||||||| ||||| || || || |||||||| ||||||||| |||| ||||| |
Sbjct 93644 AAACATGCAAATCTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTCGAGGTCGAGTC 93585
Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
| | |||| | | | ||||| || || | ||||| |||||||||||| | ||
Sbjct 93584 CTCGGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 93525
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
||| || || || |||| ||| ||||| ||||| || |||| ||||||||| |||||
Sbjct 93524 CCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCTGACTA 93465
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||||||| | || || || || ||
Sbjct 93464 CAACATCCAGAAGGAGTCGACCCTCCACCTCGT 93432
>seq121
Length=2448542
Score = 120 bits (132), Expect = 3e-22
Identities = 146/199 (73%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759
|||| || || || || ||||| ||||||||| |||| || || | |||||| | |
Sbjct 310323 TCGTCAAGACCCTTACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCCGACACCATCG 310382
Query 40760 AAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCA 40819
| | | ||| || || | ||||| ||||| || || | ||||| |||||| | |
Sbjct 310383 ACAATGTTAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAACAACGATTGA 310442
Query 40820 TCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGG 40879
| | ||| ||||| ||||| || || | ||||||||| ||||||||| ||||||||||
Sbjct 310443 TTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAATATCCAGAAGG 310502
Query 40880 AGGCCACGCTGCATCTAGT 40898
|| ||||||| ||||| ||
Sbjct 310503 AGTCCACGCTCCATCTGGT 310521
Score = 111 bits (122), Expect = 2e-19
Identities = 152/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || || ||||| || || ||| |||| || ||| | |
Sbjct 310541 ATGCAGATTTTCGTGAAGACTCTTACTGGCAAGACGATTACCCTCGAAGTTGAATCATCG 310600
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| | ||| || |||| || || ||||||||||| | |||||
Sbjct 310601 GACACCATCGACAACGTT-AAGTCCAAGATTCAGGATAAGGAGGGCATCCCTCCCGACCA 310659
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|||||| || |||| || || || || ||||| || | |||||||| || |||||
Sbjct 310660 GCAACGTCTTATCTTTGCTGGTAAGCAACTGGAAGATGGCCGCACCCTTTCTGATTACAA 310719
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||| ||||||||| |||| || || || ||
Sbjct 310720 CATTCAGAAGGAGTCCACCCTTCACCTCGT 310749
Score = 102 bits (112), Expect = 8e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || || || ||||||||||| || | || || || | ||
Sbjct 310769 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAAACCATTACGCTTGAAGTTGAGTCTTCC 310828
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | | ||| || |||| ||||| ||||| || ||| | || |||
Sbjct 310829 GATACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGAATTCCCCCCGATCAG 310888
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || ||||| | || ||||| ||||| || |||| ||||| || || |||||
Sbjct 310889 CAGCGTCTCATTTTTGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTTTCTGATTACAAT 310948
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||| ||||||| ||||| ||
Sbjct 310949 ATCCAGAAGGAGTCCACGCTCCATCTCGT 310977
Score = 95.1 bits (104), Expect = 1e-14
Identities = 133/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGG 40771
|||| ||||| ||||||||| |||| ||||| || | || | | | | | |||||
Sbjct 310025 TCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGATACCATCGACAATGTCAAGT 310084
Query 40772 AAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCA 40831
|| || | ||||| |||||||||||| | ||||| || || || || | ||| || |
Sbjct 310085 CGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAACAGCGCCTGATTTTCGCTGGAA 310144
Query 40832 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGC 40891
| ||||| || |||| || ||||| || ||||| || |||||||| |||| || |
Sbjct 310145 AGCAGCTTGAGGACGGCCGAACCCTTTCTGATTACAATATTCAGAAGGAATCCACCCTTC 310204
Query 40892 ATCTAGT 40898
| || ||
Sbjct 310205 ACCTTGT 310211
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515218066517760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |