Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq99 228 8e-55 seq165 150 2e-31 seq121 120 3e-22 >seq99 Length=2343619 Score = 228 bits (252), Expect = 8e-55 Identities = 284/384 (74%), Gaps = 4/384 (1%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||| ||||| || |||||||| |||| | | |||||| |||||| |||||| Sbjct 2126803 AGAAGGCCGACTGGGCTCTTCGCTGGATTGCCGACCGCGAGGCCACCTTCGCTCAGCGCC 2126862 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | || |||||||| ||||||||||| ||||||| || |||||| |||| || | Sbjct 2126863 TCGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATTTTCT 2126922 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||||||||| |||||||| ||||| || || || ||| ||| |||||||||||| | | Sbjct 2126923 GGCTCAAGAAGCGCGGCCTTATGCCTGGTCTTACCTTCTCCAATGAGCTCATCTCCCGTG 2126982 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 |||||||||| || |||||| || || | |||||| || | ||| || || Sbjct 2126983 ACGAGGGTCTCCACACCGACTTCGCGTGCCTCCTGTTCTCCCACCTCAAGCACCGCCCCG 2127042 Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281 | | || | ||| ||| ||| | || || || ||| ||||||||| ||||||| Sbjct 2127043 ACAAGCAGCTCATCAAGGACATCATTACTGATGCCGTCAAGATCGAGCAGGAGTTCCTCA 2127102 Query 117282 CCGAAGCGCT-GCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACAT 117339 | || || || || |||| ||||| || | || ||||| | ||| ||| ||||| Sbjct 2127103 CTGAGGCCCTCCCCTGTGC-CCTGCTCGGCATGAA-CGCGAACCTCATGAAGCAGTACAT 2127160 Query 117340 CGAGTTCGTCGCCGACAGGCTGCT 117363 ||||||||||||||||||||||| Sbjct 2127161 TGAGTTCGTCGCCGACAGGCTGCT 2127184 Score = 163 bits (180), Expect = 3e-35 Identities = 212/287 (74%), Gaps = 7/287 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||| | ||| ||| | || || Sbjct 2126379 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAAGAGATTGATCTC 2126438 Query 116696 TCCAAGGA-CACGAGCGACTGGGAGCGCTTG---AACGACAACGAGCGCCATTTCATCAA 116751 |||||||| | | | ||||||| | | | || || ||||| |||||||| Sbjct 2126439 TCCAAGGATCTCCA-CGACTGGAACAACAAGCTCAATGATGACGAGAAGTATTTCATCTC 2126497 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 |||| | || ||||| ||||||||| ||| || |||||||||||||| || || ||||| Sbjct 2126498 GCACATTCTTGCCTTCTTCGCCGCCTCCGATGGTATCGTCAACGAGAACCTCGTTGAGCG 2126557 Query 116812 TTTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCA 116870 ||| || | ||||| ||| | | ||||| || ||||||||||| || |||||| | Sbjct 2126558 ATTCAGCGC-TGAGGTCCAGATCCCTGAGGCCCGCTGCTTCTACGGTTTCCAGATCATGA 2126616 Query 116871 TGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 |||||||| | |||||||| | || || |||||| || || ||| Sbjct 2126617 TGGAGAACATCCACTCGGAGACCTACTCCCTCCTCATTGATACCTAC 2126663 >seq165 Length=1469810 Score = 150 bits (166), Expect = 2e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||| |||||||| ||||| || || || |||||||| ||||||||| |||| ||||| | Sbjct 93644 AAACATGCAAATCTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTCGAGGTCGAGTC 93585 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | | |||| | | | ||||| || || | ||||| |||||||||||| | || Sbjct 93584 CTCGGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 93525 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||| || || || |||| ||| ||||| ||||| || |||| ||||||||| ||||| Sbjct 93524 CCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCTGACTA 93465 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||||||| | || || || || || Sbjct 93464 CAACATCCAGAAGGAGTCGACCCTCCACCTCGT 93432 >seq121 Length=2448542 Score = 120 bits (132), Expect = 3e-22 Identities = 146/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759 |||| || || || || ||||| ||||||||| |||| || || | |||||| | | Sbjct 310323 TCGTCAAGACCCTTACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCCGACACCATCG 310382 Query 40760 AAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCA 40819 | | | ||| || || | ||||| ||||| || || | ||||| |||||| | | Sbjct 310383 ACAATGTTAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAACAACGATTGA 310442 Query 40820 TCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGG 40879 | | ||| ||||| ||||| || || | ||||||||| ||||||||| |||||||||| Sbjct 310443 TTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAATATCCAGAAGG 310502 Query 40880 AGGCCACGCTGCATCTAGT 40898 || ||||||| ||||| || Sbjct 310503 AGTCCACGCTCCATCTGGT 310521 Score = 111 bits (122), Expect = 2e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| || || ||| |||| || ||| | | Sbjct 310541 ATGCAGATTTTCGTGAAGACTCTTACTGGCAAGACGATTACCCTCGAAGTTGAATCATCG 310600 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | ||| || |||| || || ||||||||||| | ||||| Sbjct 310601 GACACCATCGACAACGTT-AAGTCCAAGATTCAGGATAAGGAGGGCATCCCTCCCGACCA 310659 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| || |||| || || || || ||||| || | |||||||| || ||||| Sbjct 310660 GCAACGTCTTATCTTTGCTGGTAAGCAACTGGAAGATGGCCGCACCCTTTCTGATTACAA 310719 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||||||| |||| || || || || Sbjct 310720 CATTCAGAAGGAGTCCACCCTTCACCTCGT 310749 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||||||||| || | || || || | || Sbjct 310769 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAAACCATTACGCTTGAAGTTGAGTCTTCC 310828 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | | ||| || |||| ||||| ||||| || ||| | || ||| Sbjct 310829 GATACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGAATTCCCCCCGATCAG 310888 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||| | || ||||| ||||| || |||| ||||| || || ||||| Sbjct 310889 CAGCGTCTCATTTTTGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTTTCTGATTACAAT 310948 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| ||||||| ||||| || Sbjct 310949 ATCCAGAAGGAGTCCACGCTCCATCTCGT 310977 Score = 95.1 bits (104), Expect = 1e-14 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGG 40771 |||| ||||| ||||||||| |||| ||||| || | || | | | | | ||||| Sbjct 310025 TCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGATACCATCGACAATGTCAAGT 310084 Query 40772 AAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCA 40831 || || | ||||| |||||||||||| | ||||| || || || || | ||| || | Sbjct 310085 CGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAACAGCGCCTGATTTTCGCTGGAA 310144 Query 40832 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGC 40891 | ||||| || |||| || ||||| || ||||| || |||||||| |||| || | Sbjct 310145 AGCAGCTTGAGGACGGCCGAACCCTTTCTGATTACAATATTCAGAAGGAATCCACCCTTC 310204 Query 40892 ATCTAGT 40898 | || || Sbjct 310205 ACCTTGT 310211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218066517760