Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07-
21] 176 sequences; 43,437,139 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq165 123 3e-23
seq121 111 2e-19
seq110 82.4 9e-11
>seq165
Length=1469810
Score = 123 bits (136), Expect = 3e-23
Identities = 145/196 (74%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || ||||| |||| || || || |||| || |||||||| || |||||
Sbjct 93449 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 93508
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || ||||| ||||||| || | || |||||||||| ||| || |||| |
Sbjct 93509 GATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 93568
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | |||||| || || || |||| |||||||| ||||||||||| ||||| ||
Sbjct 93569 GTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTTAGGGTCTTGAC 93628
Query 43172 AAAGATTTGCATTTTT 43187
||||||||||| |||
Sbjct 93629 GAAGATTTGCATGTTT 93644
>seq121
Length=2448542
Score = 111 bits (122), Expect = 2e-19
Identities = 142/193 (74%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || ||||||||||||| ||||| || |||| || |||||||| || || ||
Sbjct 310960 CTCCTTCTGGATATTGTAATCAGAAAGAGTGCGACCGTCCTCAAGCTGCTTGCCGGCAAA 310901
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110
||||| |||||||| |||| || | | |||||||||| ||| | || | || |
Sbjct 310900 AATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCC-TGAATCTTCGACTTCACAT 310842
Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| | | || ||| || || || || | ||| ||||||||||| || || ||||| |
Sbjct 310841 TGTCGATGGTATCGGAAGACTCAACTTCAAGCGTAATGGTTTTGCCGGTAAGGGTCTTGA 310782
Query 43171 CAAAGATTTGCAT 43183
||||||| |||||
Sbjct 310781 CAAAGATCTGCAT 310769
Score = 98.7 bits (108), Expect = 1e-15
Identities = 139/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| ||||| |||||||||| || || || | || || || ||||||||||| ||
Sbjct 310732 CTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCCAGTTGCTTACCAGCAAA 310673
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || || |||||||||| || | || |||||| ||| ||| | || | | | |||
Sbjct 310672 GATAAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTATCC-TGAATCTTGGACTTAACGT 310614
Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| | | ||||| ||||| || |||| || || || ||||| || || ||||| |
Sbjct 310613 TGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTCTTGCCAGTAAGAGTCTTCA 310554
Query 43171 CAAAGATTTGCAT 43183
| || || |||||
Sbjct 310553 CGAAAATCTGCAT 310541
Score = 95.1 bits (104), Expect = 1e-14
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||| |||||||||||||||| || || || |||| || |||||||| ||||||||
Sbjct 310193 TCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCCGTCCTCAAGCTGCTTTCCAGCGAAA 310134
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099
|| || ||||| ||||||| || | || |||||||||| ||| ||
Sbjct 310133 ATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTT 310087
>seq110
Length=3171699
Score = 82.4 bits (90), Expect = 9e-11
Identities = 129/182 (71%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053
|||| |||||||||||||||| || || || | || || |||||||| || ||||| |
Sbjct 54590 CCTTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAA 54531
Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTC 43112
| || ||||| || |||| || | | |||||||||| ||| | || | || | |
Sbjct 54530 TAAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCC-TGAATCTTGGACTTCACATTG 54472
Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172
| | |||||| || || || || | |||||||| || ||||| || ||||| ||
Sbjct 54471 TCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACG 54412
Query 43173 AA 43174
||
Sbjct 54411 AA 54410
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571816342001280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |