Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq11 136 8e-27 seq44 87.8 4e-12 >seq11 Length=1169955 Score = 136 bits (150), Expect = 8e-27 Identities = 615/956 (64%), Gaps = 34/956 (4%) Strand=Plus/Minus Query 248791 GCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAA 248850 || |||| ||||| || ||||| | ||| | | ||| | ||||| || || || Sbjct 978073 GCCATTGTCTACGACAGGGATTTCAATTACCAATACTTCGGCTTCAAGACCCTCGAACGG 978014 Query 248851 TCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGA 248910 ||||| ||||| ||| | ||||| ||||| || || ||| |||||||||| | ||||| Sbjct 978013 TCGTACCTCCTGAAACTCGATGGGAAGATTGTCGAGCGACCTCAGCACATGATTATGCGT 977954 Query 248911 GTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATG 248970 || || ||||| ||| |||||| | ||| | ||| | |||||||||| |||| Sbjct 977953 GTCGCCGTCGGTATTTGGGGCGATGACGTTGAGCGTGTGATTGAGACGTACAATCTAATG 977894 Query 248971 A-GTG--AACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTACCGTCAAC 249027 || || || | || ||||| |||| || ||||| |||||||| ||| | | Sbjct 977893 TCGTCCAAATTCT---TCACTCATGCTTCACCCACTCTCTTTAACGCCGGCACCCCCCAA 977837 Query 249028 AATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTAT 249087 |||||| || ||||| || | | |||| | || || | | || || |||||| Sbjct 977836 GCCCAGCTGTCTTCATGCTTCCTCGTCGACATGAAGGATGATAGTATTGAGGGAATTTAT 977777 Query 249088 GACACGCTTAA-ACAGACGGCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGT 249146 |||||| | || ||| | || | ||| || ||| | || || || ||||| ||| | | Sbjct 977776 GACACGTTGAAGACATGC-GCAATGATCTCAAAAATGGCCGGTGGCATCGGCCTCAACAT 977718 Query 249147 CTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATGG--GGTCAGTGATGGT 249204 | ||| || || | || || || || || |||||||| ||| | || Sbjct 977717 CCATCGCATTCGCGCCACAGGCTCATATATTGCGGGGACAAATGGAACGTC--CAACGGC 977660 Query 249205 ATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCAACCAGGCCGG---- 249260 || | ||| | ||||| ||| | ||||||||||| | | |||| | || Sbjct 977659 ATTATTCCCATGCTTCGTGTCTTCAACAACACCGCCAGGTACGTTGACCAAGGTGGTAAT 977600 Query 249261 --GCGCCGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAG 249318 ||||| ||| | || ||||| || | ||| |||||||| ||| |||| ||| Sbjct 977599 AAGCGCC---CGGGAGCCTTTGCCATCTACCTTGAACCATGGCACGCAGATGTATTCGAG 977543 Query 249319 TTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTAC 249378 ||| ||||| | |||||| ||||||| || | |||| || || |||||| | Sbjct 977542 TTCTTGGACCTTCGCAAGAACCACGGCAAAGAAGAGGTTCGAGCCCGGGATCTCTTCCTC 977483 Query 249379 GGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCTT 249438 | || ||| | |||| | |||||| || || | ||||||| ||||| || Sbjct 977482 GCGCTCTGGATTCCCGATCTTTTCATGAAGCGAGTTGAAAAGAACGGCGACTGGACCCTG 977423 Query 249439 CT-TTCTCCGTCCGACGCCCCGGACCTCATCGATCTACACGGCGCCGACTTCGA--CCAA 249495 | | | || | | ||||||| ||| |||| | || | || ||||| || Sbjct 977422 ATGTGCCCCAACGAATGCCCCGG-CCTTGCCGATTGCTATGGTGAGGAGTTCGAGGCCTT 977364 Query 249496 GCCTATAAGAAATACGAATCCAACGGCATCG---GCAAGACAATCAAGGCTCGGACCCT- 249551 | ||| | || || || | ||| || ||||||| ||||||||| | || Sbjct 977363 G--TATGAAAAGTATGAGAAGGAAGGCCGCGGTCGCAAGACTCTCAAGGCTCAAAAGCTC 977306 Query 249552 TTTTGCGAAGGTGGTGGAGTCCCAGATAGAGACAGGGGGGCCGTATTAT-TTGTTCAAAG 249610 | | || | ||||| | |||| || ||||| || | | || | | ||| | Sbjct 977305 TGGTACG-CCATCTTGGAGGCTCAGACCGAAACAGGAAATCC-TTTCATGCTTTACAAGG 977248 Query 249611 ACGCGTGCAACGCCAAGAGTAACCAACGGCATCTTGGTACCATCCGCTCGTCAAATCTCT 249670 || |||||| |||||| |||||| | | ||||| || |||||| || ||||||| Sbjct 977247 ACCACTGCAACCGCAAGAGCAACCAAAAGAACCTTGGCACTATCCGCAGCTCCAATCTCT 977188 Query 249671 GTGCAGAGGTGATTCAATACTCGTCCAAGGAGGAGATTGCCGTCTGCAACCTGGCA 249726 | | ||| | || | |||||| | ||| || | || || |||||| ||||| Sbjct 977187 GCACCGAGATCATCGAGTACTCGGCTCCGGATGAAGTGGCGGTTTGCAACTTGGCA 977132 >seq44 Length=1380919 Score = 87.8 bits (96), Expect = 4e-12 Identities = 175/260 (67%), Gaps = 27/260 (10%) Strand=Plus/Plus Query 254017 TCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAACCCTGT 254076 || |||| || ||||| || || || || || |||||||| || || ||||| | | | Sbjct 1150448 TCTACGGACCCCCCGGCACGGGTAAAACCTCCACCATCCTCGCCCTCGCCCGCCACATCT 1150507 Query 254077 TGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAACGCGGGT 254136 ||| | | |||||| | || || |||||||| ||||| || ||||| || || Sbjct 1150508 ACGGCCACGACAACATGCGCCAGATGGTCCTCGAGCTCAACGCCTCCGACGACCGAGGTA 1150567 Query 254137 TGGACGTCGTCCGCGACAAGATCAAGACTTTCTCC------AAG-ATGTCGATTTCGTCG 254189 | |||||||| ||||| | |||||||||||| || ||| | || || ||||| Sbjct 1150568 TCGACGTCGTGCGCGAACAAATCAAGACTTTCGCCTCGACGAAGCAAATCTTTTCCGTCG 1150627 Query 254190 -------TTCCAACC-------CGGCTGTCCGCC------TTTCAAGCTCGTGATCCTGG 254229 ||| || | |||| || || | ||||||||| | ||||| | Sbjct 1150628 CGCCGACTTCGAAACCCGGCGGCGGCGGTGCGGCGGCGGGGTTCAAGCTCATCATCCTCG 1150687 Query 254230 ACGAGGCGGACACCATGACG 254249 ||||||||||| |||||||| Sbjct 1150688 ACGAGGCGGACGCCATGACG 1150707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073763978656768