Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07-
21] 176 sequences; 43,437,139 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq165 114 1e-20
seq121 102 6e-17
>seq165
Length=1469810
Score = 114 bits (126), Expect = 1e-20
Identities = 146/200 (73%), Gaps = 1/200 (1%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| ||||||||||| || ||| |||| || || || || ||||||||
Sbjct 93449 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 93508
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|||| |||||||||||||| || | |||||||||||| || || ||| ||
Sbjct 93509 GATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 93568
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | ||||| ||| ||||| | ||| || ||||||||||| || ||||| ||
Sbjct 93569 GTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTTAGGGTCTTGAC 93628
Query 45325 AAAGATTTGCATG-TTGCCT 45343
|||||||||||| ||||||
Sbjct 93629 GAAGATTTGCATGTTTGCCT 93648
>seq121
Length=2448542
Score = 102 bits (112), Expect = 6e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| || ||| |||||||||||||||||| || || ||| | || ||||||||
Sbjct 310744 GTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCCAGTTG 310685
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| || || || || | || || ||||||||||| | |||||||| ||| ||| ||
Sbjct 310684 CTTACCAGCAAAGATAAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGAATCTT 310625
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
|||||| | | | ||||| || || || | ||||||||||||||| ||
Sbjct 310624 GGACTTAACGTTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTCTTGCCAGT 310565
Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336
||||||||||| || || |||||
Sbjct 310564 AAGAGTCTTCACGAAAATCTGCAT 310541
Score = 98.7 bits (108), Expect = 8e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| || |||||| ||||||||| || ||||||||| || ||| | || ||
Sbjct 310521 ACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCCTCG 310462
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || |||||||| ||||| || |||||||| ||||| | |||||||||||||
Sbjct 310461 AGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCCTGG 310402
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || |||||| | | | |||| ||| ||||| | ||| || ||||||
Sbjct 310401 ATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTCAACCTCGAGGGTGATGGTCTTG 310342
Query 45308 CCCGTCAGAGTCTTCAC 45324
|| || || ||||| ||
Sbjct 310341 CCGGTAAGGGTCTTGAC 310325
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193
|| |||||| ||||||||| || ||||| || || |||| |||| || || ||
Sbjct 310971 TGGAGCGTGGACTCCTTCTGGATATTGTAATCAGAAAGAGTGCGACCGTCCTCAAGCTGC 310912
Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253
|| ||||| || || | ||||| || ||||| || | |||||||||||| ||| ||
Sbjct 310911 TTGCCGGCAAAAATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGAATCTTC 310852
Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313
||| || | | | | || | ||| || || | ||||| || ||||| ||
Sbjct 310851 GACTTCACATTGTCGATGGTATCGGAAGACTCAACTTCAAGCGTAATGGTTTTGCCGGTA 310792
Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336
|| ||||| |||||||| |||||
Sbjct 310791 AGGGTCTTGACAAAGATCTGCAT 310769
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395074352563696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |