Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq99 136 8e-27 seq11 107 4e-18 >seq99 Length=2343619 Score = 136 bits (150), Expect = 8e-27 Identities = 123/155 (79%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 |||||||| ||||| || || || |||||||| || ||||| ||||| |||||||||||| Sbjct 2126865 GTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATTTTCTGG 2126924 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| | || || |||||||||| |||| |||||||||| |||| || | ||| Sbjct 2126925 CTCAAGAAGCGCGGCCTTATGCCTGGTCTTACCTTCTCCAATGAGCTCATCTCCCGTGAC 2126984 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 || ||||| || |||||| || ||| | ||||| Sbjct 2126985 GAGGGTCTCCACACCGACTTCGCGTGCCTCCTGTT 2127019 >seq11 Length=1169955 Score = 107 bits (118), Expect = 4e-18 Identities = 188/271 (69%), Gaps = 2/271 (1%) Strand=Plus/Plus Query 94773 ATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTC-CTTAAGAG 94831 ||| | || || ||||| || || || | || ||||| ||||| || | ||| | | Sbjct 977714 ATGGATGTTGAGGCCGATGCCACCGGCCATTTTTGAGATCATTGC-GCATGTCTTCAACG 977772 Query 94832 TATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTT 94891 | |||||||| |||||||| |||||||| | | | | | |||||||| || || || | Sbjct 977773 TGTCATAAATTCCCTCAATACTATCATCCTTCATGTCGACGAGGAAGCATGAAGACAGCT 977832 Query 94892 GGGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCG 94951 ||| | | || || ||||| || ||||| |||||||| || || | | || Sbjct 977833 GGGCTTGGGGGGTGCCGGCGTTAAAGAGAGTGGGTGAAGCATGAGTGAAGAATTTGGACG 977892 Query 94952 ACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCA 95011 |||| |||| || || ||||| ||| | | ||| || ||| ||||| || | Sbjct 977893 ACATTAGATTGTACGTCTCAATCACACGCTCAACGTCATCGCCCCAAATACCGACGGCGA 977952 Query 95012 CACGCATAATCATGTCCTGAGGGCGCTCAAC 95042 ||||||||||||||| |||||| ||||| || Sbjct 977953 CACGCATAATCATGTGCTGAGGTCGCTCGAC 977983 Score = 86.0 bits (94), Expect = 1e-11 Identities = 117/164 (71%), Gaps = 12/164 (7%) Strand=Plus/Plus Query 94398 GCCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAG 94457 |||||| |||||| || || ||||| |||| ||||| || |||| | |||| ||| Sbjct 977339 GCCTTCCTTCTCATACTTTTCATACAAGGCCTCGAACTCCTCACCATAGCAATCGGCAAG 977398 Query 94458 GCCAGGGCACTCGTGGGGGCACATCAGGGACCA------ATTCTTCCCAGCCTTCACTCT 94511 ||| ||||| |||| |||||||||||||| ||| ||||| || |||| Sbjct 977399 GCCGGGGCATTCGTTGGGGCACATCAGGGTCCAGTCGCCGTTCTTTTCA------ACTCG 977452 Query 94512 CTCCATGAAGAGATCAGATACCCAGATAGCTGGGAAAAGATCCC 94555 || |||||| ||||| | | ||||| || |||| ||||||| Sbjct 977453 CTTCATGAAAAGATCGGGAATCCAGAGCGCGAGGAAGAGATCCC 977496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989581768488080