Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq11 170 3e-37 seq99 143 4e-29 seq96 93.3 6e-14 >seq11 Length=1169955 Score = 170 bits (188), Expect = 3e-37 Identities = 335/493 (68%), Gaps = 2/493 (0%) Strand=Plus/Minus Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926 |||||| || || || ||||| || || || || | ||| ||||| | ||||| ||| Sbjct 977620 TACGTTGACCAAGGTGGTAATAAGCGCCCGGGAGCCTTTGCCATCTACCTTGAACCATGG 977561 Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986 ||||| || || || || || | || | ||||| ||| ||| ||||||| ||| Sbjct 977560 CACGCAGATGTATTCGAGTTCTTGGACCTTCGCAAGAACCACGGCAAAGAAGAGGTTCGA 977501 Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046 ||| |||| | || || |||||| | || ||| | ||||||||||| || | | Sbjct 977500 GCCCGGGATCTCTTCCTCGCGCTCTGGATTCCCGATCTTTTCATGAAGCGAGTTGAAAAG 977441 Query 97047 GGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGC 97106 ||| |||||| ||| ||||||||| || | ||||| || ||||||||| || Sbjct 977440 AACGGCGACTGGACCCTGATGTGCCCCAACGAATGCCCCGGCCTTGCCGATTGCTATGGT 977381 Query 97107 GAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGT 97165 || ||||| |||||| ||| || ||| | || ||||| || |||| | Sbjct 977380 GAGGAGTTCGAGGCCTTGTATGAAAAGTATGAGAAGGAAGGCCGCGGTCGCAAGAC-TCT 977322 Query 97166 CGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTA 97225 | | || | | | || ||| | |||||| || ||||||| || || |||| ||| | Sbjct 977321 CAAGGCTCAAAAGCTCTGGTACGCCATCTTGGAGGCTCAGACCGAAACAGGAAATCCTTT 977262 Query 97226 CATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAA 97285 ||| || |||||||| | || ||||| ||||||||| || | ||||| ||| Sbjct 977261 CATGCTTTACAAGGACCACTGCAACCGCAAGAGCAACCAAAAGAACCTTGGCACTATCCG 977202 Query 97286 GGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTG 97345 |||||||||| ||||| || || | |||||| | ||||||| || ||| ||||| Sbjct 977201 CAGCTCCAATCTCTGCACCGAGATCATCGAGTACTCGGCTCCGGATGAAGTGGCGGTTTG 977142 Query 97346 CGTTCTGGCATCG 97358 | |||||||| Sbjct 977141 CAACTTGGCATCG 977129 >seq99 Length=2343619 Score = 143 bits (158), Expect = 4e-29 Identities = 210/292 (72%), Gaps = 10/292 (3%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| ||||||| || ||||| | ||||||| | ||||| Sbjct 2126379 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAAGAGATTGATCTC 2126438 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAG----TTTAT 125134 |||||||| || |||| ||| | | | | ||| ||| ||||| || || Sbjct 2126439 TCCAAGGATCTCCACGACTGGAACAACAAGCTCAATGA---TGA-CGAGAAGTATTTCAT 2126494 Query 125135 ATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGA 125193 ||||||||| | |||||||| |||| ||||||||| ||||||||||| || || ||||| Sbjct 2126495 CTCGCACATTCTTGCCTTCTTCGCCGCCTCCGATGGTATCGTCAACGAGAACCTCGTTGA 2126554 Query 125194 CACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCA 125253 |||||| ||| | || || |||| ||||| ||||| ||||| |||| Sbjct 2126555 -GCGATTCAGCGCTGAGGTCCAGATCCCTGAGGCCCGCTGCTTCTACGGTTTCCAGATCA 2126613 Query 125254 TGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 |||| |||||| | |||||||| | ||||| || ||||| | ||||| Sbjct 2126614 TGATGGAGAACATCCACTCGGAGACCTACTCCCTCCTCATTGATACCTACAT 2126665 >seq96 Length=448441 Score = 93.3 bits (102), Expect = 6e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 126682 TCAATGTAGTCTACGATGCGTTCAATGTCACACTCTTTGACACCACGGGTCGTCACCGCA 126741 |||||||| || ||| ||| |||| |||| || |||| |||||| | |||| ||| Sbjct 236436 TCAATGTACTCAGCGACGCGCTCAAAGTCAGCCTGGTTGAAGCCACGGCTGGTCATGGCA 236377 Query 126742 GGAGTACCGAGTCTGATGCCGCTTGGTCTGAGAGCGCTCTTGTCTCCGGGTACTGTGTTT 126801 || ||||||| | ||| |||| || | || ||||||||||| ||||| | | ||| Sbjct 236376 GGGGTACCGATACGGATACCGCAGGGGGTAAGGGCGCTCTTGTCGCCGGGGATGGAGTTC 236317 Query 126802 TTGTTGCAAGCGAT 126815 |||||||||||||| Sbjct 236316 TTGTTGCAAGCGAT 236303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057569669760