Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07-
21] 176 sequences; 43,437,139 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq121 143 6e-29
seq110 111 4e-19
>seq121
Length=2448542
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | || || || ||||| ||||| || ||||| ||||| | ||||||
Sbjct 310980 AGGACGAGATGGAGCGTGGACTCCTTCTGGATATTGTAATCAGAAAGAGTGCGACCGTCC 310921
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| || || || || |||||||| || | ||| ||||| || || ||||| || || |||
Sbjct 310920 TCAAGCTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCC 310861
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
|||||||| | || ||||| || | ||||||| || || || || || ||||| ||
Sbjct 310860 TGAATCTTCGACTTCACATTGTCGATGGTATCGGAAGACTCAACTTCAAGCGTAATGGTT 310801
Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || ||||| || || ||||| ||||||||
Sbjct 310800 TTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 310769
Score = 122 bits (134), Expect = 2e-22
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || |||||||| || || ||||| || || | || ||||| ||||| || |||
Sbjct 310737 GTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCCAGTTGCTTACCA 310678
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || || | || || || ||||| || || || |||||||||||||| | ||
Sbjct 310677 GCAAAGATAAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGAATCTTGGACTTA 310618
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | ||| || | ||| || || || ||||| ||||| |||||||| ||
Sbjct 310617 ACGTTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTCTTGCCAGTAAGAGTC 310558
Query 104543 TTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 310557 TTCACGAAAATCTGCAT 310541
Score = 111 bits (122), Expect = 4e-19
Identities = 133/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| ||||||||||| || ||||| || |||| ||||| || || || ||||||
Sbjct 310199 GTGGATTCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCCGTCCTCAAGCTGCTTTCCA 310140
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| ||||| || | |||||| || || || || || || || ||||| ||||| | ||
Sbjct 310139 GCGAAAATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTG 310080
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | |||||| | || ||||| || || || ||||| || || | | ||
Sbjct 310079 ACATTGTCGATGGTATCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGACTATT 310020
Query 104543 T 104543
|
Sbjct 310019 T 310019
>seq110
Length=3171699
Score = 111 bits (122), Expect = 4e-19
Identities = 134/180 (74%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 104372 TTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT 104431
||||||||||| || ||||| || || | || || || || || ||||| || |||||
Sbjct 54588 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 54529
Query 104432 AGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCT 104491
|| | ||||||||| ||||| ||||| || || ||||||||||| | || ||||| ||
Sbjct 54528 AGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 54469
Query 104492 ACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550
| || || | ||| || ||||| || || || |||||||| || || || || || ||
Sbjct 54468 ATCGTGTC-CGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAA 54410
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151395803596608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |