Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq110 176 7e-40 >seq110 Length=3171699 Score = 176 bits (194), Expect = 7e-40 Identities = 205/274 (75%), Gaps = 2/274 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||| |||||| || |||||||| || ||||||||||| || || Sbjct 2840510 GCCAAGCGTCACCGAAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCCAT 2840568 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| |||||||||||||| || |||||| |||||| || |||| || |||| Sbjct 2840569 CCGACGTCTCGCTCGTCGTGGTGGTGTGAAGCGTATCTCTGCCATGATCTACGAGGAGAC 2840628 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | ||| ||||||| || || || | ||| || || ||||||||| Sbjct 2840629 CCGTGGTGTCCTCAAGTCCTTCCTCGAGGGTGTCATTCGTGACGCCGTCACCTATACCGA 2840688 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| |||||||| | || | |||||||| | || || || || Sbjct 2840689 GCACGCCAAGCGCAAGACCGTCACCTCTCTCGACGTTGTCTATGCCCTTAAGCGCCAGGG 2840748 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705 ||| | | || ||||| || ||||| | ||| Sbjct 2840749 CCGCACCCTCTACGGTTTCGGTGGTTAAACATCT 2840782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075039081968