Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq11 223 9e-53 >seq11 Length=1169955 Score = 223 bits (246), Expect = 9e-53 Identities = 1057/1664 (64%), Gaps = 38/1664 (2%) Strand=Plus/Minus Query 363431 TCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCC 363490 || |||| | ||||| || || || ||||| ||| | |||||||| || | ||||| Sbjct 977997 TCGATGGGAAGATTGTCGAGCGACCTCAGCACATGATTATGCGTGTCGCCGTCGGTATTT 977938 Query 363491 ATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTA---- 363546 || || ||||| | |||||| || || || ||||| || |||| | Sbjct 977937 GGGGCGATGACGTTGAGCGTGTGATTGAGACGTACAA---TCTAA-TG-TCGTCCAAATT 977883 Query 363547 -TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTC 363605 ||||| || || | || || | | || || || || | | | ||| ||||||| Sbjct 977882 CTTCACTCATGCTTCACCCACTCTCTTTAACGCCGGCACCCCCCAAGCCCAGCTGTCTTC 977823 Query 363606 TTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665 ||||| || | | |||||||| ||| || ||||| || | |||||| | |||| Sbjct 977822 ATGCTTCCTCGTCGACATGAAGGATGATAGTATTGAGGGAATTTATGACACGTTGAAGAC 977763 Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725 || || | || || || | || || || || || | ||||| |||| || Sbjct 977762 ATGCGCAATGATCTCAAAAATGGCCGGTGGCATCGGCCTCAACATCCATCGCATTCGCGC 977703 Query 363726 -ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784 |||| | || ||| || ||| ||| || || || | |||||||||||| Sbjct 977702 CACAGG-CTCATATATTGCGGGGACAAATGGAACGTCCAACGGCATTATTCCCATGCTTC 977644 Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844 |||| || |||| || || |||||||| ||||| ||||| |||||| || || | Sbjct 977643 GTGTCTTCAACAACACCGCCAGGTACGTTGACCAAGGTGGTAATAAGCGCCCGGGAGCCT 977584 Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904 |||| || || || || || || || ||| | || ||||| | || || || || | Sbjct 977583 TTGCCATCTACCTTGAACCATGGCACGCAGATGTATTCGAGTTCTTGGACCTTCGCAAGA 977524 Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964 || || ||||| || | || || || ||||| ||| || || ||| || | || | Sbjct 977523 ACCACGGCAAAGAAGAGGTTCGAGCCCGGGATCTCTTCCTCGCGCTCTGGATTCCCGATC 977464 Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATG 364022 ||| |||||||| || || | | | | | ||| | || | ||||| ||||||| Sbjct 977463 TTTTCATGAAGCGAGTTGA--AAAGAACGGCGACTGGACCCTGATGTGCCCCAACGAATG 977406 Query 364023 TCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATC 364082 || || ||| ||||| | ||||| || | | || | || ||||||||||| Sbjct 977405 CCCCGGCCTTGCCGATTGCTATGGTGAGGAGTTCGAGGCCTTGTATGAAAAGTATGAGAA 977346 Query 364083 GGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTC 364142 ||| || | ||| ||||| | || || ||||| |||| |||||| |||| | Sbjct 977345 GGAAGGCCGCGGTCGCAAGACTCTCAAGGCTCAAAAGCTCTGGTACGCCATCTTGGAGGC 977286 Query 364143 GCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAA 364202 |||| || ||||||| || | ||| | ||||| || |||||||||||| ||| Sbjct 977285 TCAGACCGAAACAGGAAATCCTTTCATGCTTTACAAGGACCACTGCAACCGCAAGAGCAA 977226 Query 364203 CCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACA 364261 ||| || ||||||| || | || |||| ||| || || |||||||| || || ||| Sbjct 977225 CCAAAAGAACCTTGGCACTA-TCCGCAGCTCCAATCTCTGCACCGAGATCATCGAGTACT 977167 Query 364262 CCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG--- 364318 | ||||| || || || || || ||| | || ||| | || | || |||| | Sbjct 977166 CGGCTCCGGATGAAGTGGCGGTTTGCAACTTGGCATCGCTTGCCTTGCCCTCGTTCGTCG 977107 Query 364319 --TAAAAGATG-----GTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATG 364369 || || | | |||| ||| || | || | || |||||| | || | Sbjct 977106 ACTACAACAAGGGCGAGTAC----GACTTTGAGAAACTCCACGAAGTAACCAAGGTCGTC 977051 Query 364370 CTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGC 364429 | | | |||||| | ||| | || || ||||| || || | | || ||| Sbjct 977050 GT--TCGAAATCTCAATAAGATCATTGATGTCAATTACTACCCGGTGCAGGAGGCCCGCA 976993 Query 364430 GTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTA 364489 |||||||| || || || |||||| | ||||| || || | || || | || Sbjct 976992 ACAGCAATATGCGCCACCGGCCCATTGGTGTGGGTGTGCAAGGATTGGCGGATGCCTTCC 976933 Query 364490 TGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTG 364549 | || ||| | || || || || || || || || |||| | ||||| | Sbjct 976932 TTGCCCTGCGTATGCCCTTCGAATCCCCCGAGGCCCGGCAGCTCAATATTCAAATCTTCG 976873 Query 364550 AAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGT 364609 | ||||| || ||||| || || || || | || || |||| | Sbjct 976872 AGACAATCTACCACGCCGCTCTGGAAGCGTCAATGGAGATCGCCAAGGAGCAGGGCCCCT 976813 Query 364610 ACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATG 364669 | || || || ||||| || || | || || |||| |||||| || | ||||||| Sbjct 976812 ATTCGACGTACGAGGGTTCTCCCGTCTCTCAAGGAATTCTCCAGTACGACATGTGGAATG 976753 Query 364670 TCACGCCATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGT 364728 ||| ||| || | | |||||||||||| | || | | | | | ||| ||||||| Sbjct 976752 TCAAGCCCTCGGACTTGTGGAACTGGGATGCTCTGAAGGAGC-AGATCAAGCAGCATGGC 976694 Query 364729 ACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGA 364788 || ||| ||| | || ||||||||||| || || | || || ||||| Sbjct 976693 GTCCGTAACAGCCTTTTGTTGGCCCCCATGCCCACTGCAAGCACCTCTCAAATTCTCGGG 976634 Query 364789 AACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGA 364848 |||||||| ||||| ||||| | || || |||| ||| || || | | || Sbjct 976633 AACAACGAATGCTTTGAACCATACACCTCGAACATTTACCAACGACGTGTCTTGGCAGGT 976574 Query 364849 GAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGT 364908 ||||| | ||| || || | || || |||||| |||| || || ||| Sbjct 976573 GAATTCCAGGTCGTCAACCCCTGGCTTCTCCGCGATCTTGTTGACCTTGGCCTTTGGTCG 976514 Query 364909 GACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTT 364968 ||| |||||||| |||||||||| ||| ||| | ||||| || ||| | || Sbjct 976513 GACTCGATGAAGAATCGCATCATCGCCGAAGGTGGCTCTATTCAGAATATCCCAAGCATT 976454 Query 364969 CCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATT 365028 || || ||| | ||| | | ||||| ||||| |||||||| ||| ||| || | | Sbjct 976453 CCCGAGGATATCAAGGCGCTCTACAAGACCGTCTGGGAAATCTCCCAGCGTACCGTTGTC 976394 Query 365029 GATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTC 365072 | ||||| |||||||| ||||| || ||| |||| ||||| Sbjct 976393 CAGATGGCTGCCGATCGGGGTGCCTTCATCGATCAGTCACAGTC 976350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303350660937632