Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq121 131 1e-25 seq165 113 4e-20 seq110 113 4e-20 seq11 86.0 5e-12 >seq121 Length=2448542 Score = 131 bits (144), Expect = 1e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | ||||| ||||| | || |||||||| || | || Sbjct 310769 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAAACCATTACGCTTGAAGTTGAGTCTTCC 310828 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| || | || || ||||| ||||||||||| ||||| |||||||| Sbjct 310829 GATACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGAATTCCCCCCGATCAG 310888 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||||||||| ||| | ||||| ||||| | || |||||||| Sbjct 310889 CAGCGTCTCATTTTTGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTTTCTGATTACAAT 310948 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 310949 ATCCAGAAGGAGTCCAC 310965 Score = 118 bits (130), Expect = 9e-22 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || ||| | || || || ||| | || || ||||| ||| | | Sbjct 310541 ATGCAGATTTTCGTGAAGACTCTTACTGGCAAGACGATTACCCTCGAAGTTGAATCATCG 310600 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || || ||||| || |||||||| || || ||||| || Sbjct 310601 GACACCATCGACAACGTTAAGTCCAAGATTCAGGATAAGGAGGGCATCCCTCCCGACCAG 310660 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||||||||| ||||| || || || | || ||| ||||||| | || ||||||||| Sbjct 310661 CAACGTCTTATCTTTGCTGGTAAGCAACTGGAAGATGGCCGCACCCTTTCTGATTACAAC 310720 Query 22399 ATTCAAAAAGAATCCACC 22416 ||||| || || |||||| Sbjct 310721 ATTCAGAAGGAGTCCACC 310738 Score = 109 bits (120), Expect = 5e-19 Identities = 128/173 (74%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| || || || || | |||| ||| | ||| || | || Sbjct 310337 ACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCCGACACCATCGACAATGTTAAGTCG 310396 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||||||||| || || |||||||| | || || |||||||| Sbjct 310397 AAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAACAACGATTGATTTTCGCCGGCAAG 310456 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | |||||| ||||||| ||||||| ||||| || || || || ||||| Sbjct 310457 CAGCTCGAGGATGGCCGCACCCTCTCCGACTACAATATCCAGAAGGAGTCCAC 310509 Score = 102 bits (112), Expect = 7e-17 Identities = 127/174 (73%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| || || || || || | |||||| | ||| || |||| Sbjct 310027 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGATACCATCGACAATGTCAAGTCG 310086 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| || || ||||| ||||| || || || || || || || Sbjct 310087 AAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAACAGCGCCTGATTTTCGCTGGAAAG 310146 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| | ||||| ||| ||| | || |||||||| ||||| || ||||||||| Sbjct 310147 CAGCTTGAGGACGGCCGAACCCTTTCTGATTACAATATTCAGAAGGAATCCACC 310200 >seq165 Length=1469810 Score = 113 bits (124), Expect = 4e-20 Identities = 146/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| |||||||| || || || || |||| || || || |||| || || || || | Sbjct 93644 AAACATGCAAATCTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTCGAGGTCGAGTC 93585 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | | || || | ||| || |||| || || || ||||||||||| || || ||||| Sbjct 93584 CTCGGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 93525 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 ||||| || || || || |||||||| ||| | ||||| ||||||| |||| || || Sbjct 93524 CCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCTGACTA 93465 Query 22395 CAACATTCAAAAAGAATCCACC 22416 |||||| || || || || ||| Sbjct 93464 CAACATCCAGAAGGAGTCGACC 93443 >seq110 Length=3171699 Score = 113 bits (124), Expect = 4e-20 Identities = 133/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || || | || ||||| || |||| ||||| || || || | || || | Sbjct 54409 TTTCGTCAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGAT 54468 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| || | || || ||||| ||||||||||| || || ||||||||||| ||||| Sbjct 54469 CGACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATCCCTCCCGATCAACAGCGTCT 54528 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 ||| || ||||| || ||| | |||||| ||||||| | || |||||||| ||||| || Sbjct 54529 TATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGATTACAATATTCAGAA 54588 >seq11 Length=1169955 Score = 86.0 bits (94), Expect = 5e-12 Identities = 262/398 (66%), Gaps = 13/398 (3%) Strand=Plus/Plus Query 130014 TTCGACTCGTTTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTCGCGCTTT 130073 ||| ||||| ||||| || | |||||| | ||| || ||| || | ||| || ||| Sbjct 977444 TTCAACTCGCTTCATGAAAAGATCGGGAATCCAGAGCGCGAGGAAGAGATCCCGGGCT-- 977501 Query 130074 TCTATCCTCGGCAC--CCATGTTACGTTTC--AGTTCAAGGAAATCGTAAATGTCGGCGT 130129 | | |||| | || || | | || | || || | ||| ||| | | || |||| Sbjct 977502 -CGAACCTCTTCTTTGCCGTGGTTC-TTGCGAAGGTCCAAGAACTCGAATACATCTGCGT 977559 Query 130130 GCCACGGTTCAACATAAATTGCCATTGCGCCCTTCCGTTTG---CCCCCTTGGTCAACGT 130186 |||| ||||||| || || || | || ||| || || || ||||||||||||| Sbjct 977560 GCCATGGTTCAAGGTAGATGGCAAAGGCTCCCGGGCGCTTATTACCACCTTGGTCAACGT 977619 Query 130187 GGCGCACGGCATTGTTGTAGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCCGTTTG 130246 | ||| |||||| |||| || | ||| | | ||||||| ||| || |||| Sbjct 977620 ACCTGGCGGTGTTGTTGAAGACACGAAGCATGGGAATAATGCCGTTGGACGTTCCATTTG 977679 Query 130247 TGCTCTCAATGAAACTGCCACGAGCCCGAACGTTATGAACGCTTAGACCTATGCCGCCGC 130306 | | | |||| | ||| || |||| | ||| | | | || || ||||| ||| Sbjct 977680 TCCCCGCAATATATGAGCCTGTGGCGCGAATGCGATGGATGTTGAGGCCGATGCCACCGG 977739 Query 130307 CAAATTTTGATATCAACGCGCAATCGCGT-AGCGTTTCATAAATGCCAACGATACTGTCT 130365 | | |||||| |||| |||| || | | | ||| |||||||| || | ||||| || Sbjct 977740 CCATTTTTGAGATCATTGCGC-ATGTCTTCAACGTGTCATAAATTCCCTCAATACTATCA 977798 Query 130366 TCTTTAATGTTTAGGAGGAAACACGAGGCCAATTGGGC 130403 || || |||| | |||||| || || | || ||||| Sbjct 977799 TCCTTCATGTCGACGAGGAAGCATGAAGACAGCTGGGC 977836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727099683440