Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07-
21] 176 sequences; 43,437,139 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq121 131 1e-25
seq165 113 4e-20
seq110 113 4e-20
seq11 86.0 5e-12
>seq121
Length=2448542
Score = 131 bits (144), Expect = 1e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || | ||||| ||||| | || |||||||| || | ||
Sbjct 310769 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAAACCATTACGCTTGAAGTTGAGTCTTCC 310828
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| || | || || ||||| ||||||||||| ||||| ||||||||
Sbjct 310829 GATACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGAATTCCCCCCGATCAG 310888
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || ||||||||||| ||| | ||||| ||||| | || ||||||||
Sbjct 310889 CAGCGTCTCATTTTTGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTTTCTGATTACAAT 310948
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || || || |||||
Sbjct 310949 ATCCAGAAGGAGTCCAC 310965
Score = 118 bits (130), Expect = 9e-22
Identities = 145/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || ||| | || || || ||| | || || ||||| ||| | |
Sbjct 310541 ATGCAGATTTTCGTGAAGACTCTTACTGGCAAGACGATTACCCTCGAAGTTGAATCATCG 310600
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | | || || ||||| || |||||||| || || ||||| ||
Sbjct 310601 GACACCATCGACAACGTTAAGTCCAAGATTCAGGATAAGGAGGGCATCCCTCCCGACCAG 310660
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||||||||| ||||| || || || | || ||| ||||||| | || |||||||||
Sbjct 310661 CAACGTCTTATCTTTGCTGGTAAGCAACTGGAAGATGGCCGCACCCTTTCTGATTACAAC 310720
Query 22399 ATTCAAAAAGAATCCACC 22416
||||| || || ||||||
Sbjct 310721 ATTCAGAAGGAGTCCACC 310738
Score = 109 bits (120), Expect = 5e-19
Identities = 128/173 (74%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
||||| || || |||| || || || || | |||| ||| | ||| || | ||
Sbjct 310337 ACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCCGACACCATCGACAATGTTAAGTCG 310396
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || ||||||||||||||||| || || |||||||| | || || ||||||||
Sbjct 310397 AAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAACAACGATTGATTTTCGCCGGCAAG 310456
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
||| | |||||| ||||||| ||||||| ||||| || || || || |||||
Sbjct 310457 CAGCTCGAGGATGGCCGCACCCTCTCCGACTACAATATCCAGAAGGAGTCCAC 310509
Score = 102 bits (112), Expect = 7e-17
Identities = 127/174 (73%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
||||| || || |||| || || || || || | |||||| | ||| || ||||
Sbjct 310027 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGATACCATCGACAATGTCAAGTCG 310086
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || ||||||||||| || || ||||| ||||| || || || || || || ||
Sbjct 310087 AAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAACAGCGCCTGATTTTCGCTGGAAAG 310146
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416
||| | ||||| ||| ||| | || |||||||| ||||| || |||||||||
Sbjct 310147 CAGCTTGAGGACGGCCGAACCCTTTCTGATTACAATATTCAGAAGGAATCCACC 310200
>seq165
Length=1469810
Score = 113 bits (124), Expect = 4e-20
Identities = 146/202 (72%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274
||| |||||||| || || || || |||| || || || |||| || || || || |
Sbjct 93644 AAACATGCAAATCTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTCGAGGTCGAGTC 93585
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334
| | || || | ||| || |||| || || || ||||||||||| || || |||||
Sbjct 93584 CTCGGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 93525
Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394
||||| || || || || |||||||| ||| | ||||| ||||||| |||| || ||
Sbjct 93524 CCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCTGACTA 93465
Query 22395 CAACATTCAAAAAGAATCCACC 22416
|||||| || || || || |||
Sbjct 93464 CAACATCCAGAAGGAGTCGACC 93443
>seq110
Length=3171699
Score = 113 bits (124), Expect = 4e-20
Identities = 133/180 (74%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
||| || || || | || ||||| || |||| ||||| || || || | || || |
Sbjct 54409 TTTCGTCAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGAT 54468
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| || | || || ||||| ||||||||||| || || ||||||||||| |||||
Sbjct 54469 CGACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATCCCTCCCGATCAACAGCGTCT 54528
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
||| || ||||| || ||| | |||||| ||||||| | || |||||||| ||||| ||
Sbjct 54529 TATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGATTACAATATTCAGAA 54588
>seq11
Length=1169955
Score = 86.0 bits (94), Expect = 5e-12
Identities = 262/398 (66%), Gaps = 13/398 (3%)
Strand=Plus/Plus
Query 130014 TTCGACTCGTTTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTCGCGCTTT 130073
||| ||||| ||||| || | |||||| | ||| || ||| || | ||| || |||
Sbjct 977444 TTCAACTCGCTTCATGAAAAGATCGGGAATCCAGAGCGCGAGGAAGAGATCCCGGGCT-- 977501
Query 130074 TCTATCCTCGGCAC--CCATGTTACGTTTC--AGTTCAAGGAAATCGTAAATGTCGGCGT 130129
| | |||| | || || | | || | || || | ||| ||| | | || ||||
Sbjct 977502 -CGAACCTCTTCTTTGCCGTGGTTC-TTGCGAAGGTCCAAGAACTCGAATACATCTGCGT 977559
Query 130130 GCCACGGTTCAACATAAATTGCCATTGCGCCCTTCCGTTTG---CCCCCTTGGTCAACGT 130186
|||| ||||||| || || || | || ||| || || || |||||||||||||
Sbjct 977560 GCCATGGTTCAAGGTAGATGGCAAAGGCTCCCGGGCGCTTATTACCACCTTGGTCAACGT 977619
Query 130187 GGCGCACGGCATTGTTGTAGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCCGTTTG 130246
| ||| |||||| |||| || | ||| | | ||||||| ||| || ||||
Sbjct 977620 ACCTGGCGGTGTTGTTGAAGACACGAAGCATGGGAATAATGCCGTTGGACGTTCCATTTG 977679
Query 130247 TGCTCTCAATGAAACTGCCACGAGCCCGAACGTTATGAACGCTTAGACCTATGCCGCCGC 130306
| | | |||| | ||| || |||| | ||| | | | || || ||||| |||
Sbjct 977680 TCCCCGCAATATATGAGCCTGTGGCGCGAATGCGATGGATGTTGAGGCCGATGCCACCGG 977739
Query 130307 CAAATTTTGATATCAACGCGCAATCGCGT-AGCGTTTCATAAATGCCAACGATACTGTCT 130365
| | |||||| |||| |||| || | | | ||| |||||||| || | ||||| ||
Sbjct 977740 CCATTTTTGAGATCATTGCGC-ATGTCTTCAACGTGTCATAAATTCCCTCAATACTATCA 977798
Query 130366 TCTTTAATGTTTAGGAGGAAACACGAGGCCAATTGGGC 130403
|| || |||| | |||||| || || | || |||||
Sbjct 977799 TCCTTCATGTCGACGAGGAAGCATGAAGACAGCTGGGC 977836
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727099683440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |