Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq154 111 3e-19 seq66 107 4e-18 seq11 86.0 1e-11 >seq154 Length=1503727 Score = 111 bits (122), Expect = 3e-19 Identities = 420/654 (64%), Gaps = 5/654 (1%) Strand=Plus/Minus Query 279711 GGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGATGTCCTA 279770 |||||||||||||||||||| || || | || ||||| || | | ||||| |||||| Sbjct 1435854 GGTGGTTGGAAGATGAAGCTTGCTCTGGCCCGAGCCATGCTCCAGAAAGCCGACGTCCTA 1435795 Query 279771 CTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTGTCCTAC 279830 || || || || || || || || | ||| ||||||| ||||| | | ||| Sbjct 1435794 CTCCTGGACGAACCTACTAATCATCTCGACGTTGCCAACGTCAAGTGGCTCGAGAATTAC 1435735 Query 279831 CTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGCTTCCTAGAT 279890 || | || | | | | | || || || ||||||||||||||||| || Sbjct 1435734 CTCAAGAGCAATACCCAGATCACCAGTTTGATCGTATCCCACGACTCTGGCTTCCTGGAC 1435675 Query 279891 GCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGCTCTCCAAGCACATCGGC 279950 | || | | | ||| ||||| |||| || ||||||| || | || |||| Sbjct 1435674 GAGGTTACCACGGATATCTACCACTACGAGCCCAACAAGAAGCTCGCCCACTACCGCGGC 1435615 Query 279951 AACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGCGGCCGCCTACTATGACCTGAAGGAC 280010 ||||| | || ||||| | ||| || ||||| ||||||| ||| | | Sbjct 1435614 AACCTCGCCGCGTTCGTCAAGATGCGACCCGAGGCCAAGAGCTACTATACCCTCTCCGCC 1435555 Query 280011 GCCACCGCCAAGTGGGAATTCCCTGAGCCAGGGTTTCTGGAGGGCATCACATCAAAGGAT 280070 ||| || | ||| | ||||| | || || | ||| || ||| || | | Sbjct 1435554 TCCAACGTCCAGTTCAAGTTCCCCGCCCCTGGTCTCCTGACCGGAGTCAAGTCCATGACC 1435495 Query 280071 CGCGCAATCATGAAGCTCCGTGGCGTCTCCTTTGCTTATCCCAATGGCCCCAA--CATCT 280128 |||||||| | ||| | | ||||||| | || ||| | ||| || |||| Sbjct 1435494 CGCGCAATTCTCAAGATGAGCAATGTCTCCTACACCTACCCCGGCGCCCCGAAGCCATCC 1435435 Query 280129 TCAGCAG-TGTCAACTCGCAGGTTTCTATGAACTCACGGATTGGTGTCATTGGACCCAAT 280187 | | || | || ||| | || || ||| || ||| |||| || ||||| Sbjct 1435434 CTCGTTGATGCCTCCTGCCAGCTCTCGCTGTCCTCTCGAGTTGCCATCATCGGTCCCAAC 1435375 Query 280188 GGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCCACTGAGGGG 280247 ||||| || ||||| || | ||||| | |||||||| || || || || || || Sbjct 1435374 GGTGCCGGCAAGTCCACTATGATCAAGCTTCTGACTGGTGA-ACTCATCCCCACGACCGG 1435316 Query 280248 TCCGTTTG-GAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTCCACCA 280306 | | | ||||||||||||| |||| || | ||| || ||||||||||| | || Sbjct 1435315 CCGAGTCGAGAAGCATCCCAACTTGCGTATCGGCTACATCAAGCAGCACGCTTTGGAGCA 1435256 Query 280307 CATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGCTATGC 280360 | |||||| || || || | ||| |||||||| ||| | |||||||| ||||| Sbjct 1435255 CGTCGAGATGCATCTCGAGAAGACGCCTAACCAGTACCTGCAGTGGCGATATGC 1435202 >seq66 Length=901868 Score = 107 bits (118), Expect = 4e-18 Identities = 177/250 (71%), Gaps = 4/250 (2%) Strand=Plus/Plus Query 279318 GACGAAGCAGAGAAGGA-GACTGAGCCAGGTGAGGATCTGTGTGACTGTGATTTCTCGCT 279376 ||||| | ||| |||| ||| ||| || ||||| || || |||| ||||| || Sbjct 340051 GACGAGGAGGAGGAGGATGAC-GAGGAGGGCGAGGACCTCTGCAACTGCACGTTCTCTCT 340109 Query 279377 CGCATATGGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGTGGCAACCG 279436 ||| ||||||| |||||||| || ||| || | ||| | ||||||||||| | || Sbjct 340110 CGCCTATGGTGCTAAGATTCTTCTCAACCAGACTGGTCTCCGCCTCAAGCGTGGCCAGCG 340169 Query 279437 GTATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCCATTGCAAA 279496 ||||||||| ||| ||||| || | || ||| ||||| ||||| ||||| || Sbjct 340170 CTATGGTCTCTGCGGCCCCAACGGCTCCGGCAAGTCTACTCTCATGCGTGCCATCAACAA 340229 Query 279497 CGGTCAGCTGGAAGGATTTCCTAACGCA-TCTGAGGTAAGGACAGTGTATGTAGAGCACG 279555 || ||| | || || || || || ||| || ||||| | ||| || | || ||||||| Sbjct 340230 CGAGCAGGTCGAGGGCTTCCCCAA-GCAGTCCGAGGTCAAGACCGTCTTCGTCGAGCACG 340288 Query 279556 ACATCGACTC 279565 || | ||||| Sbjct 340289 ACTTGGACTC 340298 Score = 84.2 bits (92), Expect = 4e-11 Identities = 92/120 (77%), Gaps = 2/120 (2%) Strand=Plus/Plus Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762 ||||| ||||| || ||||| || || || ||| ||||| | ||| ||| || || Sbjct 341482 CACTCGCGCATGCGTGGTCTCTCCGGCGGTCAGCGTGTCAAGGTCGTCCTCGCCGCCTGC 341541 Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 || |||||| | || ||| ||||||| |||||||||||||| ||||| || |||||||| Sbjct 341542 TC-GTGGCAGCGACCCCACTTGATCGTCCTCGACGAGCCTACTAACTACCTCGACCGCGA 341600 >seq11 Length=1169955 Score = 86.0 bits (94), Expect = 1e-11 Identities = 178/264 (67%), Gaps = 1/264 (0%) Strand=Plus/Plus Query 293115 CTGCGTCTGATCGACAAAGGCACCACGATCAGCAGCGAGGTCAATCACTGTCTTCATAGA 293174 ||| | |||||||| |||||||| ||||| ||||| | | | || || | || Sbjct 976352 CTGTGACTGATCGATGAAGGCACCCCGATCGGCAGCCATCTGGACAACGGTACGCTGGGA 976411 Query 293175 GATCTCCCACGATGTCTTGTACACTGCCTTGACATCAGGATGAATGCCAATAACCTTCTG 293234 ||| ||||| |||||||| | ||||||| ||| |||||| | ||||| Sbjct 976412 GATTTCCCAGACGGTCTTGTAGAGCGCCTTGATATCCTCGGGAATGCTTGGGATATTCTG 976471 Query 293235 GATAGACCCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCAAGTCCCACGAGC 293294 ||||| || || | ||| || || | |||||||| | || |||||| ||| | | Sbjct 976472 AATAGAGCCACCTTCGGCGATGATGCGATTCTTCATCGAGTCCGACCAAAGGCCAAGGTC 976531 Query 293295 AATGAGCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCGACG 293354 || || ||||||| ||| | | |||||| || |||| ||||| || | || || Sbjct 976532 AACAAGATCGCGGAGAAGCCAGGGGTTGACGACCTGGAATTCACCTGCCAAGACACGTCG 976591 Query 293355 GCTGTAAATGTTCGAAGTG-ATGG 293377 |||||||||||| ||| |||| Sbjct 976592 TTGGTAAATGTTCGAGGTGTATGG 976615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027834482228016