Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq165 105 2e-17 seq99 93.3 1e-13 seq110 89.7 1e-12 >seq165 Length=1469810 Score = 105 bits (116), Expect = 2e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | ||| ||||| ||||| || | || || || |||||| Sbjct 93450 TCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 93509 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| |||||||| ||||| || || || |||||||| || | || || || Sbjct 93510 ATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 93569 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || ||||| ||||| ||||| || || || ||||||||| Sbjct 93570 TCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACG 93629 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 93630 AAGATTTGCAT 93640 >seq99 Length=2343619 Score = 93.3 bits (102), Expect = 1e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 269119 GAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGAAT 269178 |||||| | ||| || |||| ||| | || |||| ||||| || | |||||||| Sbjct 2127093 GAGTTCCTCACTGAGGCCCTCCCCTGTGCCCTGCTCGGCATGAACGCGAACCTCATGAAG 2127152 Query 269179 CAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGTAC 269238 || || || || ||||| || || | | || || ||||| ||||||| | ||| Sbjct 2127153 CAGTACATTGAGTTCGTCGCCGACAGGCTGCTCGTCGCCCTCGGAAATGAGAAGATCTAC 2127212 Query 269239 AATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTTC 269298 | || | || ||||||| ||| ||||| || || |||| || ||||| |||||| Sbjct 2127213 AGGTCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGTGGCAAGACCAACTTC 2127272 Query 269299 TTCGAAAAGCGTGTCAGCGACTATCA 269324 ||||| |||||||| | ||||| || Sbjct 2127273 TTCGAGAAGCGTGTTGGTGACTACCA 2127298 >seq110 Length=3171699 Score = 89.7 bits (98), Expect = 1e-12 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || || ||||| || || | || ||||| || || || | || ||||| ||||| || Sbjct 54588 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 54529 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 |||||||||||| |||||||| || || ||||| || || | ||||| || || Sbjct 54528 AGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 54469 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | || || || || || || ||||| ||||| || || || ||||||||||| Sbjct 54468 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAA 54410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179651739879328