Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07-
21] 176 sequences; 43,437,139 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq121 116 4e-21
seq165 102 8e-17
>seq121
Length=2448542
Score = 116 bits (128), Expect = 4e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | ||| || || || || || |||||||| | | ||||| ||||
Sbjct 310980 AGGACGAGATGGAGCGTGGACTCCTTCTGGATATTGTAATCAGAAAGAGTGCGACCGTCC 310921
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|||||||||||||||||| ||||||| |||||||| ||||| |||||||| || || ||
Sbjct 310920 TCAAGCTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCC 310861
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| || | ||||| | || ||||| | || | |||
Sbjct 310860 TGAATCTTCGACTTCACATTGTCGATGGTATCGGAAGACTCAACTTCAAGCGTAATGGTT 310801
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||||| | || || || || || |||||
Sbjct 310800 TTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 310769
Score = 96.9 bits (106), Expect = 3e-15
Identities = 134/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| || ||||| || ||||| |||||||| | | ||| || ||||
Sbjct 310214 AGAACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCCGTCC 310155
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||||||||| || || |||| || ||||| |||||||| || || || || || ||
Sbjct 310154 TCAAGCTGCTTTCCAGCGAAAATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCC 310095
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| || | |||||| || || || || | || | ||||
Sbjct 310094 TGGATCTTCGACTTGACATTGTCGATGGTATCAGAGGACTCGACCTCGAGGGTGATGGTC 310035
Query 64412 TTGCCGGT 64419
||||||||
Sbjct 310034 TTGCCGGT 310027
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| || || || || |||||||||||||| | | |||||| | |||
Sbjct 310752 AGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCT 310693
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| || ||||| || ||| | || || || |||||||||||||| || || || || ||
Sbjct 310692 TCCAGTTGCTTACCAGCAAAGATAAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTATCC 310633
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || || | || || | || ||||| | || | |||
Sbjct 310632 TGAATCTTGGACTTAACGTTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTC 310573
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| || | ||| || |||||||| |||||
Sbjct 310572 TTGCCAGTAAGAGTCTTCACGAAAATCTGCAT 310541
>seq165
Length=1469810
Score = 102 bits (112), Expect = 8e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
|||||| || | | || || || || | ||||| || || || |||||||| || |
Sbjct 93413 ACCGCCACGAAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGA 93472
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| |||||| |||| || |||||||||||||| | || || ||||| |||||||| ||
Sbjct 93473 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGG 93532
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| || || || || || || || ||| ||| || | || || || || ||
Sbjct 93533 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGAC 93592
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| | || | ||||||||| || | || || ||||| |||||||| ||
Sbjct 93593 CTCGAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACGAAGATTTGCATGTT 93643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499643700781440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |