Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq121 116 4e-21 seq165 102 8e-17 >seq121 Length=2448542 Score = 116 bits (128), Expect = 4e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | ||| || || || || || |||||||| | | ||||| |||| Sbjct 310980 AGGACGAGATGGAGCGTGGACTCCTTCTGGATATTGTAATCAGAAAGAGTGCGACCGTCC 310921 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 |||||||||||||||||| ||||||| |||||||| ||||| |||||||| || || || Sbjct 310920 TCAAGCTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCC 310861 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | ||||| | || ||||| | || | ||| Sbjct 310860 TGAATCTTCGACTTCACATTGTCGATGGTATCGGAAGACTCAACTTCAAGCGTAATGGTT 310801 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||| | || || || || || ||||| Sbjct 310800 TTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 310769 Score = 96.9 bits (106), Expect = 3e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| || ||||| || ||||| |||||||| | | ||| || |||| Sbjct 310214 AGAACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCCGTCC 310155 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||||||||| || || |||| || ||||| |||||||| || || || || || || Sbjct 310154 TCAAGCTGCTTTCCAGCGAAAATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCC 310095 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | |||||| || || || || | || | |||| Sbjct 310094 TGGATCTTCGACTTGACATTGTCGATGGTATCAGAGGACTCGACCTCGAGGGTGATGGTC 310035 Query 64412 TTGCCGGT 64419 |||||||| Sbjct 310034 TTGCCGGT 310027 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| || || || || |||||||||||||| | | |||||| | ||| Sbjct 310752 AGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCT 310693 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || ||||| || ||| | || || || |||||||||||||| || || || || || Sbjct 310692 TCCAGTTGCTTACCAGCAAAGATAAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTATCC 310633 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | || || | || ||||| | || | ||| Sbjct 310632 TGAATCTTGGACTTAACGTTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTC 310573 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | ||| || |||||||| ||||| Sbjct 310572 TTGCCAGTAAGAGTCTTCACGAAAATCTGCAT 310541 >seq165 Length=1469810 Score = 102 bits (112), Expect = 8e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | || || || || | ||||| || || || |||||||| || | Sbjct 93413 ACCGCCACGAAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGA 93472 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| |||| || |||||||||||||| | || || ||||| |||||||| || Sbjct 93473 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGG 93532 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| ||| || | || || || || || Sbjct 93533 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGAC 93592 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | || | ||||||||| || | || || ||||| |||||||| || Sbjct 93593 CTCGAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACGAAGATTTGCATGTT 93643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499643700781440