Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq11 188 7e-43 >seq11 Length=1169955 Score = 188 bits (208), Expect = 7e-43 Identities = 600/920 (65%), Gaps = 8/920 (1%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 |||||| | ||||| | |||||| || || || |||||||||||| || | ||||| Sbjct 978049 AATTACCAATACTTCGGCTTCAAGACCCTCGAACGGTCGTACCTCCTGAAACTCGATGGG 977990 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | || ||||||||| || || || | ||||| |||||| |||| ||| ||| | Sbjct 977989 AAGATTGTCGAGCGACCTCAGCACATGATTATGCGTGTCGCCGTCGGTATTTGGGGCGAT 977930 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893 ||| | | ||| | | | | || ||| | ||| | || |||| | Sbjct 977929 GACGTTGAGCGTGTGATTGAGACGTACAATCTAATGTCGTCCAAATTCTTCACTCATG-C 977871 Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953 | || || || || ||||| || ||||| | ||| ||||||| || ||||| | Sbjct 977870 TTCACCCACTCTCTTTAACGCCGGCACCCCCCAAGCCCAGCTGTCTTCATGCTTCCTCGT 977811 Query 93954 -GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 ||| | |||| || || ||||||| |||| | ||| || || | | Sbjct 977810 CGAC-ATGAAGGATGATAGTATTGAGGGAATTTATGACACGTTGAAGACATGCGCAATGA 977752 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072 |||||||| || || || ||||| ||| |||| | | || |||| || || | Sbjct 977751 TCTCAAAAATGGCCGGTGGCATCGGCCTCAACATCCATCGCATTCGCGCCACAGGCTCAT 977692 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 | || || || ||||| || ||||||||| | | || ||||| || |||||||||| Sbjct 977691 ATATTGCGGGGACAAATGGAACGTCCAACGGCATTATTCCCATGCTTCGTGTCTTCAACA 977632 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 || | || | ||||| ||||| |||||| | | | ||| | || || |||| | Sbjct 977631 ACACCGCCAGGTACGTTGACCAAGGTGGTAATAAGCGCCCGGGAGCCTTTGCCATCTACC 977572 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 | || || |||||||| || || | ||| | ||||| || |||||||||||||| | Sbjct 977571 TTGAACCATGGCACGCAGATGTATTCGAGTTCTTGGACCTTCGCAAGAACCACGGCAAAG 977512 Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 | || | ||| | || |||||| ||| |||||| | || || ||||| ||||| | Sbjct 977511 AAGAGGTTCGAGCCCGGGATCTCTTCCTCGCGCTCTGGATTCCCGATCTTTTCATGAAGC 977452 Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372 | || || || ||| || ||||| || | || ||||| ||||| ||||| || ||| Sbjct 977451 GAGTTGAAAAGAACGGCGACTGGACCCTGATGTGCCCCAACGAATGCCCCGGCCTTGCCG 977392 Query 94373 ACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGA-ATCGCAGGGCAAGGCC 94431 | | ||| | || || | |||||||| || || | | ||| | || | Sbjct 977391 ATTGCTATGGTGAGGAGTTCGAGGCCTTGTATGAAAAGTATGAGAAGGAAGGCCGCGGTC 977332 Query 94432 AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACG 94491 | ||| | | | ||| ||||| ||| | ||| |||| | ||| || || Sbjct 977331 -GCAAGACTCTCAAGGCTCAAAAGCTCTGGTACGCCATCTTGGAGGCTCAGACCGAAACA 977273 Query 94492 GGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCT 94550 || | || | ||| | | |||||| | ||| |||| |||| |||||| || |||| Sbjct 977272 GGAAATCCTTTCATGCTTTACAAGGACCACTG-CAACCGCAAGAGCAACCAAAAGAACCT 977214 Query 94551 CGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGA 94610 || ||| ||||| ||||| ||||||||||| ||||||| | ||||||| || Sbjct 977213 TGGCACTATCCGCAGCTCCAATCTCTGCACCGAGATCATCGAGTACTCGGCTCCGGATGA 977154 Query 94611 GATTGCTGTGTGTAACCTGG 94630 | || || || ||| ||| Sbjct 977153 AGTGGCGGTTTGCAACTTGG 977134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722111608960